RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 RNF183Q96D59 192 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 TMEM243Q9BU79 118 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 NOTCH3Q9UM47 2321 aa8.21□□□□□ -1.1
PRPF40B-203ENST00000508736 TRRAPQ9Y4A5 3859 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 H7C423 109 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE7O76087 117 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE12FP0CL80 117 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE12GP0CL81 117 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE12IP0CL82 117 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 SBSPONQ8IVN8 264 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 KIR2DL5BQ8NHK3 375 aa8.2□□□□□ -1.1
PRPF40B-203ENST00000508736 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 H7C2G1 150 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 LINC00694P0DN24 101 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
PRPF40B-203ENST00000508736 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
PRPF40B-203ENST00000508736 FOXI1Q12951 378 aa8.18□□□□□ -1.1
PRPF40B-203ENST00000508736 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
PRPF40B-203ENST00000508736 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
PRPF40B-203ENST00000508736 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 A8MZ25 164 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 M0QXV9 152 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 ATXN8Q156A1 80 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 ADAMTSL4-AS1Q5T5F5 129 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 LINC00612Q8N6U2 182 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 PPDPFLQ8WWR9 84 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 APOC4P55056 127 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 COX6A2Q02221 97 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
PRPF40B-203ENST00000508736 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
PRPF40B-203ENST00000508736 COX6CP09669 75 aa8.16□□□□□ -1.1
PRPF40B-203ENST00000508736 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
PRPF40B-203ENST00000508736 Q9H8V8 135 aa8.16□□□□□ -1.1
PRPF40B-203ENST00000508736 X6R8D5 127 aa8.16□□□□□ -1.1
PRPF40B-203ENST00000508736 C9JAW5 83 aa8.15□□□□□ -1.11
PRPF40B-203ENST00000508736 SLC25A20O43772 301 aa8.15□□□□□ -1.11
PRPF40B-203ENST00000508736 HERV-K104P63124 156 aa8.15□□□□□ -1.11
PRPF40B-203ENST00000508736 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.11
PRPF40B-203ENST00000508736 PKD1L1Q8TDX9 2849 aa8.15□□□□□ -1.11
PRPF40B-203ENST00000508736 NPC2P61916 151 aa8.14□□□□□ -1.11
PRPF40B-203ENST00000508736 TRIAP1O43715 76 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 FHL2Q14192 279 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 TRBV6-8A0A0A6YYG3 113 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 LYRM9A8MSI8 78 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 F5H768 121 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 ANKRD29Q8N6D5 301 aa8.13□□□□□ -1.11
PRPF40B-203ENST00000508736 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
PRPF40B-203ENST00000508736 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
PRPF40B-203ENST00000508736 ANK2Q01484 3957 aa8.12□□□□□ -1.11
PRPF40B-203ENST00000508736 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 CHCHD5Q9BSY4 110 aa8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 PPDPFQ9H3Y8 114 aa8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 GAGE6Q13070 117 aa8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 DAND5Q8N907 189 aa8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
PRPF40B-203ENST00000508736 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
PRPF40B-203ENST00000508736 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 DEFB130BP0DP73 79 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 DEFB130AP0DP74 79 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 MIFP14174 115 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
PRPF40B-203ENST00000508736 TMEM262E9PQX1 116 aa8.09□□□□□ -1.12
PRPF40B-203ENST00000508736 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.12
PRPF40B-203ENST00000508736 COX7B2Q8TF08 81 aa8.09□□□□□ -1.12
PRPF40B-203ENST00000508736 H3BT86 120 aa8.08□□□□□ -1.12
PRPF40B-203ENST00000508736 EGFEM1PQ0D2K5 195 aa8.08□□□□□ -1.12
PRPF40B-203ENST00000508736 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
PRPF40B-203ENST00000508736 FAM222AQ5U5X8 452 aa8.07□□□□□ -1.12
PRPF40B-203ENST00000508736 DNHD1Q96M86 4753 aa8.07□□□□□ -1.12
PRPF40B-203ENST00000508736 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 LST1O00453 97 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 GYPEP15421 78 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 Q8NAQ8 132 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
PRPF40B-203ENST00000508736 NTN5Q8WTR8 489 aaPredicted RBP8.05□□□□□ -1.12
PRPF40B-203ENST00000508736 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
PRPF40B-203ENST00000508736 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
PRPF40B-203ENST00000508736 A0A087WZ39 114 aa8.04□□□□□ -1.12
PRPF40B-203ENST00000508736 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
PRPF40B-203ENST00000508736 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
PRPF40B-203ENST00000508736 CLEC2BQ92478 149 aa8.04□□□□□ -1.12
PRPF40B-203ENST00000508736 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms