RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MRPS26Q9BYN8 205 aaKnown RBP2.54□□□□□ -2
HERC4-213ENST00000506515 MIXL1Q9H2W2 232 aa2.54□□□□□ -2
HERC4-213ENST00000506515 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
HERC4-213ENST00000506515 FAT4Q6V0I7 4981 aa2.53□□□□□ -2
HERC4-213ENST00000506515 IGHV3-64A0A075B6Q5 118 aa2.53□□□□□ -2
HERC4-213ENST00000506515 TRAV26-2A0A0B4J265 109 aa2.53□□□□□ -2
HERC4-213ENST00000506515 TRAV21A0A0B4J279 112 aa2.53□□□□□ -2
HERC4-213ENST00000506515 A8MWV9 139 aa2.53□□□□□ -2
HERC4-213ENST00000506515 FAM25AB3EWG3 89 aa2.53□□□□□ -2
HERC4-213ENST00000506515 FAM25CB3EWG5 89 aa2.53□□□□□ -2
HERC4-213ENST00000506515 FAM25GB3EWG6 89 aa2.53□□□□□ -2
HERC4-213ENST00000506515 SLC17A3O00476 420 aa2.53□□□□□ -2
HERC4-213ENST00000506515 CD3DP04234 171 aa2.53□□□□□ -2
HERC4-213ENST00000506515 AKAIN1P0CW23 69 aa2.53□□□□□ -2
HERC4-213ENST00000506515 IGLC2P0DOY2 106 aa2.53□□□□□ -2
HERC4-213ENST00000506515 MIAQ16674 131 aa2.53□□□□□ -2
HERC4-213ENST00000506515 FAM229BQ4G0N7 80 aa2.53□□□□□ -2
HERC4-213ENST00000506515 TMEM128Q5BJH2 165 aa2.53□□□□□ -2
HERC4-213ENST00000506515 AGPAT4-IT1Q9H0P7 198 aa2.53□□□□□ -2
HERC4-213ENST00000506515 LYRM2Q9NU23 88 aaPredicted RBP2.53□□□□□ -2
HERC4-213ENST00000506515 COMMD3Q9UBI1 195 aa2.53□□□□□ -2
HERC4-213ENST00000506515 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
HERC4-213ENST00000506515 TRBV19A0A075B6N1 114 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 TMEM262E9PQX1 116 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 AP3S2P59780 193 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 SPCS2Q15005 226 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 Q6AWC8 147 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 SLC25A21Q9BQT8 299 aaPredicted RBP2.52□□□□□ -2.01
HERC4-213ENST00000506515 PSENENQ9NZ42 101 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 MUC2Q02817 5179 aa2.52□□□□□ -2.01
HERC4-213ENST00000506515 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 NBEAP1P0C6P0 100 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 SFTA3P0C7M3 94 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 IAPPP10997 89 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 S100A11P31949 105 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 VBP1P61758 197 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
HERC4-213ENST00000506515 SMAGPQ0VAQ4 97 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 CIRBPQ14011 172 aaKnown RBP2.51□□□□□ -2.01
HERC4-213ENST00000506515 SCGB1D4Q6XE38 83 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 CLVS1Q8IUQ0 354 aaPredicted RBP2.51□□□□□ -2.01
HERC4-213ENST00000506515 STOML3Q8TAV4 291 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 ASB13Q8WXK3 278 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
HERC4-213ENST00000506515 RSL24D1Q9UHA3 163 aaKnown RBP2.51□□□□□ -2.01
HERC4-213ENST00000506515 TRAV1-1A0A0B4J248 108 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 LINC00862A6NCI5 91 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 H3BQ15 152 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 HPGDSO60760 199 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 S100A10P60903 97 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 MRPL51Q4U2R6 128 aaKnown RBP2.5□□□□□ -2.01
HERC4-213ENST00000506515 PATE2Q6UY27 113 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 TSKUQ8WUA8 353 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 NMES1Q9C002 83 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 MED28Q9H204 178 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 SPANXB1Q9NS25 103 aaPredicted RBP2.5□□□□□ -2.01
HERC4-213ENST00000506515 PLAC8Q9NZF1 115 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 ALG5Q9Y673 324 aa2.5□□□□□ -2.01
HERC4-213ENST00000506515 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 TCRBP04435 133 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
HERC4-213ENST00000506515 AQP4P55087 323 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 TAS2R45P59539 299 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 C4orf26Q17RF5 130 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 SAPCD1Q5SSQ6 148 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 CFAP126Q5VTH2 177 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 TMEM14EPQ6UXP3 125 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 PARD6GQ9BYG4 376 aaPredicted RBP2.49□□□□□ -2.01
HERC4-213ENST00000506515 OR5AC2Q9NZP5 309 aa2.49□□□□□ -2.01
HERC4-213ENST00000506515 TRBV7-3A0A075B6L6 115 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 A0A087WXM4 84 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 C17orf112F2Z3M2 114 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 M0R3E3 92 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 GNRH2O43555 120 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 ANGP03950 147 aaKnown RBP2.48□□□□□ -2.01
HERC4-213ENST00000506515 METTL15P1P0C7V9 234 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 RRAS2P62070 204 aaPredicted RBP2.48□□□□□ -2.01
HERC4-213ENST00000506515 SLC38A11Q08AI6 406 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 WFDC2Q14508 124 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 IAH1Q2TAA2 248 aaPredicted RBP2.48□□□□□ -2.01
HERC4-213ENST00000506515 STX12Q86Y82 276 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 RAB2BQ8WUD1 216 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 SMIM4Q8WVI0 70 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 SMDT1Q9H4I9 107 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 UQCC1Q9NVA1 299 aa2.48□□□□□ -2.01
HERC4-213ENST00000506515 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 HMGB3O15347 200 aaKnown RBP2.47□□□□□ -2.01
HERC4-213ENST00000506515 SSSCA1O60232 199 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 SFT2D2O95562 160 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 ESDP10768 282 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 LINC00313P59037 77 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 RANP62826 216 aaKnown RBP2.47□□□□□ -2.01
HERC4-213ENST00000506515 CTAG1AP78358 180 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 NEDD8Q15843 81 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 IZUMO2Q6UXV1 221 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 ATP5L2Q7Z4Y8 100 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 EXOC3-AS1Q8N2X6 119 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 MCFD2Q8NI22 146 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
HERC4-213ENST00000506515 DIRAS2Q96HU8 199 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms