RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 Q9BRP9 147 aa4.29□□□□□ -1.72
CDH9-202ENST00000505020 PI4KAP42356 2102 aa4.29□□□□□ -1.72
CDH9-202ENST00000505020 NRXN2Q9P2S2 1712 aa4.29□□□□□ -1.72
CDH9-202ENST00000505020 DLEC1Q9Y238 1755 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 TRBV6-5A0A0K0K1A5 114 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 M0R3E3 92 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 HMGA1P17096 107 aaKnown RBP4.28□□□□□ -1.72
CDH9-202ENST00000505020 Q86TA4 180 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 CMC2Q9NRP2 79 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
CDH9-202ENST00000505020 MRC1P22897 1456 aa4.27□□□□□ -1.73
CDH9-202ENST00000505020 A0A087WYN8 130 aa4.27□□□□□ -1.73
CDH9-202ENST00000505020 TRIOBPQ9H2D6 2365 aa4.27□□□□□ -1.73
CDH9-202ENST00000505020 ZNF831Q5JPB2 1677 aa4.26□□□□□ -1.73
CDH9-202ENST00000505020 MYO7BQ6PIF6 2116 aa4.26□□□□□ -1.73
CDH9-202ENST00000505020 SLPIP03973 132 aa4.26□□□□□ -1.73
CDH9-202ENST00000505020 CTSGP08311 255 aa4.26□□□□□ -1.73
CDH9-202ENST00000505020 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
CDH9-202ENST00000505020 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 AMELXQ99217 191 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 TTTY12Q9BZ98 90 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 LRCOL1A6NCL2 159 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 IFI6P09912 130 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 PATE1Q8WXA2 126 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 RP1P56715 2156 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 MED12Q93074 2177 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 TNRC6BQ9UPQ9 1833 aaKnown RBP4.25□□□□□ -1.73
CDH9-202ENST00000505020 TET1Q8NFU7 2136 aa4.25□□□□□ -1.73
CDH9-202ENST00000505020 CR1P17927 2039 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 F8VRH5 84 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 Q6ZTI0 123 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 PRO3102Q9H379 93 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 COL4A1P02462 1669 aa4.24□□□□□ -1.73
CDH9-202ENST00000505020 PPYP01298 95 aa4.23□□□□□ -1.73
CDH9-202ENST00000505020 CCL3L1P16619 93 aa4.23□□□□□ -1.73
CDH9-202ENST00000505020 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
CDH9-202ENST00000505020 ZNF563Q8TA94 476 aa4.23□□□□□ -1.73
CDH9-202ENST00000505020 COX7B2Q8TF08 81 aa4.23□□□□□ -1.73
CDH9-202ENST00000505020 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
CDH9-202ENST00000505020 MRGPRG-AS1Q2M3A8 158 aa4.22□□□□□ -1.73
CDH9-202ENST00000505020 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
CDH9-202ENST00000505020 CACNA1DQ01668 2161 aa4.22□□□□□ -1.73
CDH9-202ENST00000505020 PAPPA2Q9BXP8 1791 aa4.22□□□□□ -1.73
CDH9-202ENST00000505020 PRR14LQ5THK1 2151 aa4.21□□□□□ -1.73
CDH9-202ENST00000505020 IGKV3OR2-268A0A0C4DH90 116 aa4.21□□□□□ -1.74
CDH9-202ENST00000505020 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
CDH9-202ENST00000505020 C4orf3Q8WVX3 66 aa4.21□□□□□ -1.74
CDH9-202ENST00000505020 CCL18P55774 89 aa4.21□□□□□ -1.74
CDH9-202ENST00000505020 R4GMQ9 66 aa4.21□□□□□ -1.74
CDH9-202ENST00000505020 PCDH15Q96QU1 1955 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 M0R135 149 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 IGLV3-1P01715 115 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 FCER1GP30273 86 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 COL4A5P29400 1685 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 BCORQ6W2J9 1755 aa4.2□□□□□ -1.74
CDH9-202ENST00000505020 DNAL4O96015 105 aa4.19□□□□□ -1.74
CDH9-202ENST00000505020 NDPQ00604 133 aa4.19□□□□□ -1.74
CDH9-202ENST00000505020 DEFB123Q8N688 67 aa4.19□□□□□ -1.74
CDH9-202ENST00000505020 CEP290O15078 2479 aa4.19□□□□□ -1.74
CDH9-202ENST00000505020 PRRC2BQ5JSZ5 2229 aaKnown RBP4.19□□□□□ -1.74
CDH9-202ENST00000505020 A0A1B0GUT8 65 aa4.18□□□□□ -1.74
CDH9-202ENST00000505020 PDE6GP18545 87 aa4.18□□□□□ -1.74
CDH9-202ENST00000505020 PLAC8Q9NZF1 115 aa4.18□□□□□ -1.74
CDH9-202ENST00000505020 IGKV3-20P01619 116 aa4.18□□□□□ -1.74
CDH9-202ENST00000505020 CCL26Q9Y258 94 aa4.18□□□□□ -1.74
CDH9-202ENST00000505020 A0A0C4DFX4 3053 aa4.17□□□□□ -1.74
CDH9-202ENST00000505020 SZT2Q5T011 3432 aa4.17□□□□□ -1.74
CDH9-202ENST00000505020 DNAJC13O75165 2243 aa4.17□□□□□ -1.74
CDH9-202ENST00000505020 ABRACLQ9P1F3 81 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 UNC13CQ8NB66 2214 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 COL6A3P12111 3177 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 K7EMI3 77 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 HRES1P13985 223 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 LY6EQ16553 131 aa4.16□□□□□ -1.74
CDH9-202ENST00000505020 ARFGEF3Q5TH69 2177 aa4.15□□□□□ -1.75
CDH9-202ENST00000505020 ZFHX3Q15911 3703 aa4.15□□□□□ -1.75
CDH9-202ENST00000505020 ABCA4P78363 2273 aa4.15□□□□□ -1.75
CDH9-202ENST00000505020 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
CDH9-202ENST00000505020 NREPQ16612 68 aa4.14□□□□□ -1.75
CDH9-202ENST00000505020 IGKV3D-15A0A087WSY6 115 aa4.14□□□□□ -1.75
CDH9-202ENST00000505020 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
CDH9-202ENST00000505020 JMJD7-PLA2G4BH0Y9G9 81 aa4.14□□□□□ -1.75
CDH9-202ENST00000505020 TTC28Q96AY4 2481 aa4.13□□□□□ -1.75
CDH9-202ENST00000505020 SPAG17Q6Q759 2223 aa4.13□□□□□ -1.75
CDH9-202ENST00000505020 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
CDH9-202ENST00000505020 UQCR11O14957 56 aa4.13□□□□□ -1.75
CDH9-202ENST00000505020 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
CDH9-202ENST00000505020 CACNA1AO00555 2505 aa4.12□□□□□ -1.75
CDH9-202ENST00000505020 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
CDH9-202ENST00000505020 WFDC10AQ9H1F0 79 aa4.12□□□□□ -1.75
CDH9-202ENST00000505020 LINC00846Q9NV44 126 aa4.12□□□□□ -1.75
CDH9-202ENST00000505020 V9GYV3 84 aa4.12□□□□□ -1.75
CDH9-202ENST00000505020 CTXND1A0A1B0GTU2 59 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 MGPP08493 103 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 ZNF137PP52743 207 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 CAV3P56539 151 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms