RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ATP5G1P05496 136 aa14.87□□□□□ -0.03
UBE2D3-216ENST00000503742 IGHV3-30P01768 117 aa14.86□□□□□ -0.03
UBE2D3-216ENST00000503742 IGHV3-30-5P0DP03 117 aa14.86□□□□□ -0.03
UBE2D3-216ENST00000503742 ANK2Q01484 3957 aa14.86□□□□□ -0.03
UBE2D3-216ENST00000503742 IGLV4-60A0A075B6I1 120 aa14.85□□□□□ -0.03
UBE2D3-216ENST00000503742 A0A0J9YXY3 114 aa14.85□□□□□ -0.03
UBE2D3-216ENST00000503742 IGLV5-39A0A0G2JS06 123 aa14.85□□□□□ -0.03
UBE2D3-216ENST00000503742 F8W1H4 67 aa14.85□□□□□ -0.03
UBE2D3-216ENST00000503742 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
UBE2D3-216ENST00000503742 NDUFA12Q9UI09 145 aa14.84□□□□□ -0.03
UBE2D3-216ENST00000503742 PKD1L1Q8TDX9 2849 aa14.84□□□□□ -0.03
UBE2D3-216ENST00000503742 MAST4O15021 2626 aa14.83□□□□□ -0.04
UBE2D3-216ENST00000503742 TMEM238LA0A1B0GVL6 79 aa14.82□□□□□ -0.04
UBE2D3-216ENST00000503742 A6NJY4 79 aa14.82□□□□□ -0.04
UBE2D3-216ENST00000503742 F5H768 121 aa14.82□□□□□ -0.04
UBE2D3-216ENST00000503742 TRAV26-1A0A087WT03 109 aa14.81□□□□□ -0.04
UBE2D3-216ENST00000503742 A0A096LPF7 62 aa14.81□□□□□ -0.04
UBE2D3-216ENST00000503742 TEX48A0A1B0GUV7 120 aa14.81□□□□□ -0.04
UBE2D3-216ENST00000503742 SMIM1B2RUZ4 78 aa14.81□□□□□ -0.04
UBE2D3-216ENST00000503742 LITAFQ99732 161 aa14.81□□□□□ -0.04
UBE2D3-216ENST00000503742 A0A1B0GUV1 79 aa14.8□□□□□ -0.04
UBE2D3-216ENST00000503742 TMEM238C9JI98 176 aa14.8□□□□□ -0.04
UBE2D3-216ENST00000503742 RETNQ9HD89 108 aa14.8□□□□□ -0.04
UBE2D3-216ENST00000503742 J3QR89 54 aa14.79□□□□□ -0.04
UBE2D3-216ENST00000503742 NDUFA1O15239 70 aa14.78□□□□□ -0.04
UBE2D3-216ENST00000503742 RPL24P83731 157 aaKnown RBP14.77□□□□□ -0.04
UBE2D3-216ENST00000503742 COL6A5A8TX70 2615 aa14.76□□□□□ -0.05
UBE2D3-216ENST00000503742 TMEM262E9PQX1 116 aa14.75□□□□□ -0.05
UBE2D3-216ENST00000503742 HTN3P15516 51 aa14.75□□□□□ -0.05
UBE2D3-216ENST00000503742 MRPL23Q16540 153 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-216ENST00000503742 SPANXDQ9BXN6 97 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 SPANXCQ9NY87 97 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 IGKV3OR2-268A0A0C4DH90 116 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 TIMM17BO60830 172 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 ADAMTSL4-AS1Q5T5F5 129 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 MUSTN1Q8IVN3 82 aa14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 C11orf68Q9H3H3 251 aaKnown RBP14.74□□□□□ -0.05
UBE2D3-216ENST00000503742 IGHV3OR16-9A0A0B4J2B5 98 aa14.73□□□□□ -0.05
UBE2D3-216ENST00000503742 LINC00959A0A1B0GUT2 108 aa14.73□□□□□ -0.05
UBE2D3-216ENST00000503742 CFC1BP0CG36 223 aa14.73□□□□□ -0.05
UBE2D3-216ENST00000503742 CFC1P0CG37 223 aa14.73□□□□□ -0.05
UBE2D3-216ENST00000503742 SH2D6Q7Z4S9 175 aa14.73□□□□□ -0.05
UBE2D3-216ENST00000503742 LYRM7Q5U5X0 104 aa14.72□□□□□ -0.05
UBE2D3-216ENST00000503742 Q9H8V8 135 aa14.72□□□□□ -0.05
UBE2D3-216ENST00000503742 ICOSQ9Y6W8 199 aa14.72□□□□□ -0.05
UBE2D3-216ENST00000503742 A4D1N5 150 aa14.71□□□□□ -0.05
UBE2D3-216ENST00000503742 H3BMG7 143 aa14.71□□□□□ -0.05
UBE2D3-216ENST00000503742 APOMO95445 188 aa14.71□□□□□ -0.05
UBE2D3-216ENST00000503742 ZNF625Q96I27 306 aaPredicted RBP14.71□□□□□ -0.06
UBE2D3-216ENST00000503742 MIAQ16674 131 aa14.7□□□□□ -0.06
UBE2D3-216ENST00000503742 PGPEP1Q9NXJ5 209 aa14.7□□□□□ -0.06
UBE2D3-216ENST00000503742 A0A087WZ39 114 aa14.69□□□□□ -0.06
UBE2D3-216ENST00000503742 WFDC2Q14508 124 aa14.69□□□□□ -0.06
UBE2D3-216ENST00000503742 EIF4EBP3O60516 100 aaPredicted RBP14.68□□□□□ -0.06
UBE2D3-216ENST00000503742 LELP1Q5T871 98 aa14.68□□□□□ -0.06
UBE2D3-216ENST00000503742 PRO0461Q9UI25 63 aa14.68□□□□□ -0.06
UBE2D3-216ENST00000503742 SCGB1A1P11684 91 aa14.67□□□□□ -0.06
UBE2D3-216ENST00000503742 TSPAN13O95857 204 aa14.67□□□□□ -0.06
UBE2D3-216ENST00000503742 H3BNG1 76 aa14.66□□□□□ -0.06
UBE2D3-216ENST00000503742 A0A0B4J2C4 111 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 PRSS2P07478 247 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 SS18Q15532 418 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 HERV-K104P63124 156 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 CIRBPQ14011 172 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 Q6ZTC4 211 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 Q8N3U1 123 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 COX7B2Q8TF08 81 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 PRO1854Q9UHT4 67 aa14.65□□□□□ -0.06
UBE2D3-216ENST00000503742 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 IFITM1P13164 125 aa14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 A0A0J9YWU9 116 aa14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 ETDBQ3ZM63 59 aa14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 C5orf38Q86SI9 138 aa14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 LINC00269Q8N2A0 174 aa14.64□□□□□ -0.07
UBE2D3-216ENST00000503742 CLPSL2Q6UWE3 100 aa14.63□□□□□ -0.07
UBE2D3-216ENST00000503742 SPATA25Q9BR10 227 aa14.63□□□□□ -0.07
UBE2D3-216ENST00000503742 SIGMAR1Q99720 223 aa14.62□□□□□ -0.07
UBE2D3-216ENST00000503742 XCL1P47992 114 aa14.62□□□□□ -0.07
UBE2D3-216ENST00000503742 LYPD5Q6UWN5 251 aa14.62□□□□□ -0.07
UBE2D3-216ENST00000503742 DAND5Q8N907 189 aa14.61□□□□□ -0.07
UBE2D3-216ENST00000503742 TRBV20-1A0A075B6N2 111 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 GAGE12HA6NDE8 117 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 IGHV3-33P01772 117 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 ANGP03950 147 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 KPRPQ5T749 579 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 LINC01561Q8N1V8 128 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 TENM3Q9P273 2699 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 NOTCH1P46531 2555 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 PRB2P02812 416 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 REG3AQ06141 175 aa14.6□□□□□ -0.07
UBE2D3-216ENST00000503742 K7EIL1 84 aa14.59□□□□□ -0.07
UBE2D3-216ENST00000503742 NPC2P61916 151 aa14.59□□□□□ -0.07
UBE2D3-216ENST00000503742 TOMM7Q9P0U1 55 aa14.59□□□□□ -0.07
UBE2D3-216ENST00000503742 MEIG1Q5JSS6 88 aa14.58□□□□□ -0.08
UBE2D3-216ENST00000503742 CD164L2Q6UWJ8 174 aa14.58□□□□□ -0.08
UBE2D3-216ENST00000503742 LINC00308Q8TCZ7 52 aa14.58□□□□□ -0.08
UBE2D3-216ENST00000503742 NANOS2P60321 138 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-216ENST00000503742 LOC107984156A0A0G2JMH3 177 aa14.56□□□□□ -0.08
UBE2D3-216ENST00000503742 ARL17AQ8IVW1 177 aa14.56□□□□□ -0.08
UBE2D3-216ENST00000503742 C11orf45Q8TAV5 145 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms