RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IGKV1-9A0A0C4DH69 117 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRDV1A0A1B0GX56 115 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF670-ZNF695F2Z2N8 137 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 K7EIL1 84 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 CRYGAP11844 174 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 EDDM3BP56851 147 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 MINOS1Q5TGZ0 78 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SLC25A26Q70HW3 274 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 C5orf17Q8NAS9 161 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 WFDC9Q8NEX5 89 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 OR10AC1Q8NH08 325 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF714Q96N38 554 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SLC25A21Q9BQT8 299 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 SMCO4Q9NRQ5 59 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 AMMECR1Q9Y4X0 333 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 LINC00312Q9Y6C7 94 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRBV7-6A0A0J9YX20 115 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 A0A1B0GW64 132 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 LOC107986453A0A1B0GWG9 222 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TCRBV4S1A1TA0A5B7 111 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 MPC2O95563 127 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 IGLC6P0CF74 106 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMBIM6P55061 237 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 S100A10P60903 97 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 CDK5R1Q15078 307 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 PEA15Q15121 130 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 RTL8BQ17RB0 113 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 HEPN1Q6WQI6 88 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q8IYB0 196 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 KCNRGQ8N5I3 272 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 BORCS8Q96FH0 119 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 BET1LQ9NYM9 111 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
HMGB1P3-201ENST00000502802 TRGV10A0A0A0MS01 117 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ODAMA1E959 279 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 H7BYZ3 331 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 PDCD5O14737 125 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 NFYBP25208 207 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ZNF93P35789 620 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 DIAPH2-AS1Q14236 149 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 ELOBQ15370 118 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RRN3P1Q2M238 152 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 VMA21Q3ZAQ7 101 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 DEFB121Q5J5C9 76 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMEM244Q5VVB8 128 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q5XG85 94 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 MRPL54Q6P161 138 aaKnown RBP2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 TMEM14EPQ6UXP3 125 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 Q6ZQT0 140 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 EXOC3-AS1Q8N2X6 119 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 C10orf126Q8N4M7 172 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 OR5AK2Q8NH90 309 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 LEAP2Q969E1 77 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RAB37Q96AX2 223 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 LINC00052Q96N35 136 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 COMMD3Q9UBI1 195 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 RYR2Q92736 4967 aa2.22□□□□□ -2.05
HMGB1P3-201ENST00000502802 C7orf71A4D174 169 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 OOSP1A8MZH6 123 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 J3QLW9 94 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 CYB5AP00167 134 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 LINC00694P0DN24 101 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 IFITM1P13164 125 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 SNCAP37840 140 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 QRFPP83859 136 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HMGN3Q15651 99 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 PIGYQ3MUY2 71 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 XAF1Q6GPH4 301 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q6ZRN7 208 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 COA5Q86WW8 74 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 ATOH7Q8N100 152 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 C5orf56Q8N8D9 126 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 OR5D14Q8NGL3 314 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 AQP10Q96PS8 301 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 NAA60Q9H7X0 242 aa2.21□□□□□ -2.06
HMGB1P3-201ENST00000502802 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 LOC100130705A0A1B0GUX0 176 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF736B4DX44 427 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 APOC3P02656 99 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 SPINK8P0C7L1 97 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 IGLC1P0CG04 106 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 SDC2P34741 201 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 FAM74A1Q5RGS3 127 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms