RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 RPL39P5Q59GN2 51 aa2.9□□□□□ -1.95
XPA-204ENST00000496104 ZC2HC1BQ5TFG8 222 aa2.9□□□□□ -1.95
XPA-204ENST00000496104 TEN1Q86WV5 123 aa2.9□□□□□ -1.95
XPA-204ENST00000496104 Q8IYB0 196 aa2.9□□□□□ -1.95
XPA-204ENST00000496104 KCNRGQ8N5I3 272 aa2.9□□□□□ -1.95
XPA-204ENST00000496104 CIB3Q96Q77 187 aaPredicted RBP2.9□□□□□ -1.95
XPA-204ENST00000496104 NHP2Q9NX24 153 aaKnown RBP2.9□□□□□ -1.95
XPA-204ENST00000496104 IGKV3-7A0A075B6H7 116 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.89□□□□□ -1.95
XPA-204ENST00000496104 A6NED7 52 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 MRPS14O60783 128 aaKnown RBP2.89□□□□□ -1.95
XPA-204ENST00000496104 TCRAP04437 139 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 RNASE4P34096 147 aaKnown RBP2.89□□□□□ -1.95
XPA-204ENST00000496104 MRPS36P82909 103 aaKnown RBP2.89□□□□□ -1.95
XPA-204ENST00000496104 KLK9Q2XQG4 91 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 C10orf55Q5SWW7 151 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 BPIFA4PQ86YQ2 179 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 SNX29P2Q8IUI4 249 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 MIR7-3HGQ8N6C7 128 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 PACRGLQ8N7B6 248 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 SMDT1Q9H4I9 107 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 KLK9Q9UKQ9 250 aa2.89□□□□□ -1.95
XPA-204ENST00000496104 LOC100130705A0A1B0GUX0 176 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 FAM168BA1KXE4 195 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 A8MWP4 228 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 CREBL2O60519 120 aaPredicted RBP2.88□□□□□ -1.95
XPA-204ENST00000496104 PMP2P02689 132 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 MT-ND6P03923 174 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 SHBGP04278 402 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
XPA-204ENST00000496104 DPPA3Q6W0C5 159 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 TMEM91Q6ZNR0 172 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 Q6ZQT7 251 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 OTOSQ8NHW6 89 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 SMCR5Q8TEV8 140 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 RBPMSQ93062 196 aaKnown RBP2.88□□□□□ -1.95
XPA-204ENST00000496104 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 LINC00467Q9BRT7 94 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 SNHG12Q9BXW3 62 aa2.88□□□□□ -1.95
XPA-204ENST00000496104 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 TRAV12-2A0A075B6T6 113 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 FAM236AA0A1B0GUQ0 79 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 FAM236BA0A1B0GV22 79 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 E7EUB6 86 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 H3BMM0 161 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 HBDP02042 147 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 SLC25A5P05141 298 aaKnown RBP2.87□□□□□ -1.95
XPA-204ENST00000496104 TRGC1P0CF51 173 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 TPT1P13693 172 aaKnown RBP2.87□□□□□ -1.95
XPA-204ENST00000496104 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 PIGYQ3MUY2 71 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 GFI1BQ5VTD9 330 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 ZFP2Q6ZN57 461 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 C7orf65Q6ZTY9 151 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 SAXO1Q8IYX7 474 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 SVBPQ8N300 66 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 C9orf62Q8N4C0 152 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 TTC9CQ8N5M4 171 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 DIRC1Q969H9 104 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 RAB37Q96AX2 223 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 COMMD3Q9UBI1 195 aa2.87□□□□□ -1.95
XPA-204ENST00000496104 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
XPA-204ENST00000496104 TRBV20-1A0A075B6N2 111 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 LECT2O14960 151 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 S100A10P60903 97 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 Q56UQ5 140 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 KHDC3LQ587J8 217 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 SDIM1Q6ZPB5 146 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 RNF5Q99942 180 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 TTTY10Q9BZA0 68 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 SLC35B3Q9H1N7 401 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 ICOSQ9Y6W8 199 aa2.86□□□□□ -1.95
XPA-204ENST00000496104 TMEM235A6NFC5 223 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 SYNGR2O43760 224 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 CD2P06729 351 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 TGFBR1P36897 503 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 ZNF90Q03938 601 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 TTTY13Q9BZ97 58 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 AP4S1Q9Y587 144 aa2.85□□□□□ -1.95
XPA-204ENST00000496104 A0A087WYN8 130 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 TMEM30CPA0ZSE6 113 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 K7ERJ3 54 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 FXYD1O00168 92 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 LYRM1O43325 122 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 SPINK8P0C7L1 97 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 SAA1P0DJI8 122 aaPredicted RBP2.84□□□□□ -1.95
XPA-204ENST00000496104 IFITM1P13164 125 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 SNRPD3P62318 126 aaKnown RBP2.84□□□□□ -1.95
XPA-204ENST00000496104 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 ASB16-AS1Q495Z4 193 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
XPA-204ENST00000496104 FOXI2Q6ZQN5 318 aa2.84□□□□□ -1.95
XPA-204ENST00000496104 C5orf17Q8NAS9 161 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms