RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 Q6ZUT4 128 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
PRPF3-206ENST00000493553 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 ZFHX3Q15911 3703 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 A0A0J9YY99 117 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 TIMM17BO60830 172 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 IGHV4-30-4P0DP06 118 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 FABP2P12104 132 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 DEFB135Q30KP9 77 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 KRTAP24-1Q3LI83 254 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 LYRM7Q5U5X0 104 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 DEFB104AQ8WTQ1 72 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 VSIG2Q96IQ7 327 aa7.05□□□□□ -1.28
PRPF3-206ENST00000493553 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 A0A0J9YXY3 114 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 IGHV3-30-3P0DP02 117 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
PRPF3-206ENST00000493553 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
PRPF3-206ENST00000493553 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 FAM104AQ969W3 186 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 Q9UF83 564 aa7.04□□□□□ -1.28
PRPF3-206ENST00000493553 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.03□□□□□ -1.28
PRPF3-206ENST00000493553 A0A1B0GUV1 79 aa7.03□□□□□ -1.28
PRPF3-206ENST00000493553 FXYD2P54710 66 aa7.03□□□□□ -1.28
PRPF3-206ENST00000493553 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
PRPF3-206ENST00000493553 ZFAND6Q6FIF0 208 aa7.03□□□□□ -1.28
PRPF3-206ENST00000493553 CEMP1Q6PRD7 247 aaPredicted RBP7.03□□□□□ -1.28
PRPF3-206ENST00000493553 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
PRPF3-206ENST00000493553 NHP2Q9NX24 153 aaKnown RBP7.03□□□□□ -1.28
PRPF3-206ENST00000493553 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
PRPF3-206ENST00000493553 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 GAGE10A6NGK3 116 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 IFITM1P13164 125 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 HERV-K104P63124 156 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 LINC00242Q5T6M2 205 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 Q8NAQ8 132 aa7.02□□□□□ -1.29
PRPF3-206ENST00000493553 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
PRPF3-206ENST00000493553 H3BNG1 76 aa7.01□□□□□ -1.29
PRPF3-206ENST00000493553 NDUFA1O15239 70 aa7.01□□□□□ -1.29
PRPF3-206ENST00000493553 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
PRPF3-206ENST00000493553 NTN5Q8WTR8 489 aaPredicted RBP7.01□□□□□ -1.29
PRPF3-206ENST00000493553 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
PRPF3-206ENST00000493553 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
PRPF3-206ENST00000493553 H3BUT2 72 aa7□□□□□ -1.29
PRPF3-206ENST00000493553 C11orf68Q9H3H3 251 aaKnown RBP7□□□□□ -1.29
PRPF3-206ENST00000493553 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
PRPF3-206ENST00000493553 ICOSQ9Y6W8 199 aa7□□□□□ -1.29
PRPF3-206ENST00000493553 NIPBLQ6KC79 2804 aaeCLIP6.99□□□□□ -1.29
PRPF3-206ENST00000493553 IGHV3-30P01768 117 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 IGHV3-30-5P0DP03 117 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 SS18Q15532 418 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 SPATA3Q8NHX4 192 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 SPANXCQ9NY87 97 aa6.99□□□□□ -1.29
PRPF3-206ENST00000493553 TENM1Q9UKZ4 2725 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 LOC100131303A0A0U1RQF7 123 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 IGLL5B9A064 214 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 K7EP34 96 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 GAGE6Q13070 117 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
PRPF3-206ENST00000493553 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
PRPF3-206ENST00000493553 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 TMEM262E9PQX1 116 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 F5H768 121 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 MAST4O15021 2626 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 MIAQ16674 131 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 PRO1854Q9UHT4 67 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 SPCS1Q9Y6A9 102 aa6.97□□□□□ -1.29
PRPF3-206ENST00000493553 TRBV20-1A0A075B6N2 111 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 A0A087WZ39 114 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 LELP1Q5T871 98 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 C10orf126Q8N4M7 172 aa6.96□□□□□ -1.3
PRPF3-206ENST00000493553 PRSS2P07478 247 aa6.95□□□□□ -1.3
PRPF3-206ENST00000493553 RBX1P62877 108 aa6.95□□□□□ -1.3
PRPF3-206ENST00000493553 VWFP04275 2813 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 K7EP13 123 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 KRTAP10-11P60412 298 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 STAB1Q9NY15 2570 aa6.94□□□□□ -1.3
PRPF3-206ENST00000493553 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 A4D1N5 150 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 K7ERJ3 54 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 MALP21145 153 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 CXCL5P42830 114 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 COX6A2Q02221 97 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 Q9H8V8 135 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms