RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CRYBA4P53673 196 aa8.78□□□□□ -1
HMGN1-220ENST00000492280 CLPSL2Q6UWE3 100 aa8.78□□□□□ -1
HMGN1-220ENST00000492280 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
HMGN1-220ENST00000492280 CLEC2BQ92478 149 aa8.78□□□□□ -1
HMGN1-220ENST00000492280 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
HMGN1-220ENST00000492280 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
HMGN1-220ENST00000492280 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
HMGN1-220ENST00000492280 A0A0B4J2C4 111 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 TRBV10-1A0A0K0K1A3 114 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 FOXI1Q12951 378 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 ANKRD29Q8N6D5 301 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 CARD19Q96LW7 228 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 NOTCH1P46531 2555 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
HMGN1-220ENST00000492280 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 FHL2Q14192 279 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 C11orf68Q9H3H3 251 aaKnown RBP8.76□□□□□ -1.01
HMGN1-220ENST00000492280 HERVK_113P63121 156 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 PRIMA1Q86XR5 153 aa8.76□□□□□ -1.01
HMGN1-220ENST00000492280 RPL13AP40429 203 aaKnown RBP8.75□□□□□ -1.01
HMGN1-220ENST00000492280 TIRAPP58753 221 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-220ENST00000492280 NDUFA1O15239 70 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 SLC25A20O43772 301 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 SPANXDQ9BXN6 97 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 SPANXCQ9NY87 97 aa8.75□□□□□ -1.01
HMGN1-220ENST00000492280 F5H768 121 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 TENM3Q9P273 2699 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 FBN1P35555 2871 aaKnown RBP8.74□□□□□ -1.01
HMGN1-220ENST00000492280 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 Q8N3U1 123 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
HMGN1-220ENST00000492280 GYPEP15421 78 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 TRBV20-1A0A075B6N2 111 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 J3QR89 54 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 OVOL2Q9BRP0 275 aa8.73□□□□□ -1.01
HMGN1-220ENST00000492280 TRBV6-8A0A0A6YYG3 113 aa8.72□□□□□ -1.01
HMGN1-220ENST00000492280 X6R8D5 127 aa8.72□□□□□ -1.01
HMGN1-220ENST00000492280 LINC01620Q4KN68 170 aa8.71□□□□□ -1.01
HMGN1-220ENST00000492280 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.01
HMGN1-220ENST00000492280 TMEM262E9PQX1 116 aa8.71□□□□□ -1.02
HMGN1-220ENST00000492280 CMC4P56277 68 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-220ENST00000492280 FAM222AQ5U5X8 452 aa8.71□□□□□ -1.02
HMGN1-220ENST00000492280 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
HMGN1-220ENST00000492280 SIGMAR1Q99720 223 aa8.7□□□□□ -1.02
HMGN1-220ENST00000492280 FAM110AQ9BQ89 295 aa8.7□□□□□ -1.02
HMGN1-220ENST00000492280 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
HMGN1-220ENST00000492280 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
HMGN1-220ENST00000492280 XCL1P47992 114 aa8.69□□□□□ -1.02
HMGN1-220ENST00000492280 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
HMGN1-220ENST00000492280 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
HMGN1-220ENST00000492280 MT-ATP8P03928 68 aa8.68□□□□□ -1.02
HMGN1-220ENST00000492280 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
HMGN1-220ENST00000492280 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
HMGN1-220ENST00000492280 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
HMGN1-220ENST00000492280 CIDEAO60543 219 aa8.68□□□□□ -1.02
HMGN1-220ENST00000492280 HTN3P15516 51 aa8.68□□□□□ -1.02
HMGN1-220ENST00000492280 PFN2P35080 140 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 XGP55808 180 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 IGLV10-54A0A075B6I4 117 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
HMGN1-220ENST00000492280 H7C423 109 aa8.66□□□□□ -1.02
HMGN1-220ENST00000492280 TIMM17BO60830 172 aa8.65□□□□□ -1.02
HMGN1-220ENST00000492280 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
HMGN1-220ENST00000492280 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.02
HMGN1-220ENST00000492280 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.03
HMGN1-220ENST00000492280 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
HMGN1-220ENST00000492280 IGHV4-28A0A0C4DH34 117 aa8.64□□□□□ -1.03
HMGN1-220ENST00000492280 IFITM1P13164 125 aa8.64□□□□□ -1.03
HMGN1-220ENST00000492280 LINC00158P58513 81 aa8.64□□□□□ -1.03
HMGN1-220ENST00000492280 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
HMGN1-220ENST00000492280 PAX4O43316 350 aa8.63□□□□□ -1.03
HMGN1-220ENST00000492280 COX6CP09669 75 aa8.63□□□□□ -1.03
HMGN1-220ENST00000492280 KIR2DL5BQ8NHK3 375 aa8.63□□□□□ -1.03
HMGN1-220ENST00000492280 NBEAL1Q6ZS30 2694 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 TRBV10-2A0A0K0K1G8 114 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 TRAV26-1A0A087WT03 109 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 LST1O00453 97 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 C9orf66Q5T8R8 295 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
HMGN1-220ENST00000492280 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
HMGN1-220ENST00000492280 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
HMGN1-220ENST00000492280 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
HMGN1-220ENST00000492280 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
HMGN1-220ENST00000492280 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
HMGN1-220ENST00000492280 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms