RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 MIFP14174 115 aa8.41□□□□□ -1.06
SRGAP3-210ENST00000491467 NTM-AS1Q6ZSK4 140 aa8.41□□□□□ -1.06
SRGAP3-210ENST00000491467 Q6ZUT4 128 aa8.41□□□□□ -1.06
SRGAP3-210ENST00000491467 C12orf74Q32Q52 190 aa8.4□□□□□ -1.06
SRGAP3-210ENST00000491467 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.06
SRGAP3-210ENST00000491467 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-210ENST00000491467 CDC42SE2Q9NRR3 84 aa8.4□□□□□ -1.06
SRGAP3-210ENST00000491467 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 CCL25O15444 150 aa8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 IGHV3-30-3P0DP02 117 aa8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 Q6ZVH6 145 aa8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 PRO0255Q9UI72 69 aa8.39□□□□□ -1.07
SRGAP3-210ENST00000491467 TRBV6-8A0A0A6YYG3 113 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 TEX48A0A1B0GUV7 120 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 A8MZ25 164 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 H3BUT2 72 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 FABP2P12104 132 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
SRGAP3-210ENST00000491467 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 TIMM17BO60830 172 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 LY6G6CO95867 125 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 DEFB130BP0DP73 79 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 DEFB130AP0DP74 79 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 RAB37Q96AX2 223 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 RNF183Q96D59 192 aa8.37□□□□□ -1.07
SRGAP3-210ENST00000491467 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
SRGAP3-210ENST00000491467 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
SRGAP3-210ENST00000491467 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SRGAP3-210ENST00000491467 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
SRGAP3-210ENST00000491467 SH2D6Q7Z4S9 175 aa8.36□□□□□ -1.07
SRGAP3-210ENST00000491467 IGLL5B9A064 214 aa8.35□□□□□ -1.07
SRGAP3-210ENST00000491467 K7EP34 96 aa8.35□□□□□ -1.07
SRGAP3-210ENST00000491467 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-210ENST00000491467 FAM222AQ5U5X8 452 aa8.35□□□□□ -1.07
SRGAP3-210ENST00000491467 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
SRGAP3-210ENST00000491467 TRAV26-1A0A087WT03 109 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 LOC100131303A0A0U1RQF7 123 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 PAX4O43316 350 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 SPART-AS1P0CW21 52 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 DAD1P61803 113 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 DEFB135Q30KP9 77 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
SRGAP3-210ENST00000491467 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 K7EP13 123 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 NDUFA1O15239 70 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 ATP5G1P05496 136 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 IFITM1P13164 125 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 GYPEP15421 78 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 Q8NAQ8 132 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 LINC00476Q8WZB0 136 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 SPCS1Q9Y6A9 102 aa8.33□□□□□ -1.08
SRGAP3-210ENST00000491467 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 HERV-K104P63124 156 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 COX6A2Q02221 97 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 PPDPFQ9H3Y8 114 aa8.32□□□□□ -1.08
SRGAP3-210ENST00000491467 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
SRGAP3-210ENST00000491467 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
SRGAP3-210ENST00000491467 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
SRGAP3-210ENST00000491467 C10orf126Q8N4M7 172 aa8.31□□□□□ -1.08
SRGAP3-210ENST00000491467 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
SRGAP3-210ENST00000491467 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
SRGAP3-210ENST00000491467 GAGE6Q13070 117 aa8.3□□□□□ -1.08
SRGAP3-210ENST00000491467 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
SRGAP3-210ENST00000491467 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
SRGAP3-210ENST00000491467 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 F5H768 121 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 K7ERJ3 54 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 CFC1P0CG37 223 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
SRGAP3-210ENST00000491467 MIAQ16674 131 aa8.28□□□□□ -1.08
SRGAP3-210ENST00000491467 LITAFQ99732 161 aa8.28□□□□□ -1.08
SRGAP3-210ENST00000491467 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
SRGAP3-210ENST00000491467 A4D1N5 150 aa8.27□□□□□ -1.09
SRGAP3-210ENST00000491467 F8W1H4 67 aa8.27□□□□□ -1.09
SRGAP3-210ENST00000491467 H3BNG1 76 aa8.27□□□□□ -1.09
SRGAP3-210ENST00000491467 APOMO95445 188 aa8.27□□□□□ -1.09
SRGAP3-210ENST00000491467 SS18Q15532 418 aa8.27□□□□□ -1.09
SRGAP3-210ENST00000491467 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
SRGAP3-210ENST00000491467 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
SRGAP3-210ENST00000491467 NAA38Q9BRA0 125 aaKnown RBP8.26□□□□□ -1.09
SRGAP3-210ENST00000491467 ICOSQ9Y6W8 199 aa8.26□□□□□ -1.09
SRGAP3-210ENST00000491467 A0A087WZ39 114 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms