RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 SHROOM2Q13796 1616 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 APC2O95996 2303 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 TCHHQ07283 1943 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 PCLOQ9Y6V0 5065 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 HERC2O95714 4834 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 CHKB-CPT1BH3BT56 60 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 RPL13AP3Q6NVV1 102 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 DEFB123Q8N688 67 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 LRP1BQ9NZR2 4599 aa-0.55□□□□□ -2.5
SEMA3A-207ENST00000490883 TENM2Q9NT68 2774 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 CREBBPQ92793 2442 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 BTAF1O14981 1849 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 TMEM263Q8WUH6 116 aaKnown RBP-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 DPH3P1Q9H4G8 78 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 NXT2Q9NPJ8 142 aaKnown RBP-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 SETXQ7Z333 2677 aaKnown RBP-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 SMG6Q86US8 1419 aaKnown RBP-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 NSD3Q9BZ95 1437 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 CHD8Q9HCK8 2581 aa-0.56□□□□□ -2.5
SEMA3A-207ENST00000490883 UBE2L5PA0A1B0GUS4 154 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 MGPP08493 103 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 COX6B1P14854 86 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 SPRR1BP22528 89 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 UBE2L3P68036 154 aaKnown RBP-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 C9orf153Q5TBE3 101 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 COL6A3P12111 3177 aa-0.57□□□□□ -2.5
SEMA3A-207ENST00000490883 ZFHX3Q15911 3703 aa-0.58□□□□□ -2.5
SEMA3A-207ENST00000490883 STAB2Q8WWQ8 2551 aa-0.58□□□□□ -2.5
SEMA3A-207ENST00000490883 EFCAB10A6NFE3 127 aa-0.58□□□□□ -2.5
SEMA3A-207ENST00000490883 IGLC1P0CG04 106 aa-0.58□□□□□ -2.5
SEMA3A-207ENST00000490883 URB1O60287 2271 aaKnown RBP-0.58□□□□□ -2.5
SEMA3A-207ENST00000490883 TSC2P49815 1807 aa-0.59□□□□□ -2.5
SEMA3A-207ENST00000490883 UQCR10Q9UDW1 63 aa-0.59□□□□□ -2.5
SEMA3A-207ENST00000490883 IER3IP1Q9Y5U9 82 aa-0.59□□□□□ -2.5
SEMA3A-207ENST00000490883 ARHGEF5Q12774 1597 aa-0.59□□□□□ -2.5
SEMA3A-207ENST00000490883 NALCNQ8IZF0 1738 aa-0.59□□□□□ -2.5
SEMA3A-207ENST00000490883 WDR7Q9Y4E6 1490 aa-0.6□□□□□ -2.5
SEMA3A-207ENST00000490883 K7EQZ3 153 aa-0.6□□□□□ -2.51
SEMA3A-207ENST00000490883 FAM167A-AS1Q96KT0 104 aa-0.6□□□□□ -2.51
SEMA3A-207ENST00000490883 EP300Q09472 2414 aaPredicted RBP-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 DLEU1O43261 78 aa-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 WHAMMP3Q1A5X7 153 aa-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 C10orf113Q5VZT2 155 aa-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 HMGXB3Q12766 1538 aa-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 PRKDCP78527 4128 aaKnown RBP-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 DOPEY1Q5JWR5 2465 aa-0.61□□□□□ -2.51
SEMA3A-207ENST00000490883 A0A1B0GV90 55 aa-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 FAM24AA6NFZ4 105 aa-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 ATP5EP56381 51 aaPredicted RBP-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 KRTAP19-8Q3LI54 63 aa-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 FAIMQ9NVQ4 179 aa-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 ARL2-SNX15V9GYD0 113 aa-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 POLA1P09884 1462 aaPredicted RBP-0.62□□□□□ -2.51
SEMA3A-207ENST00000490883 PKHD1P08F94 4074 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 HYDINQ4G0P3 5121 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 TULP4Q9NRJ4 1543 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 ARHGEF12Q9NZN5 1544 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 NF1P21359 2839 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 SNAPC5O75971 98 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 GNG11P61952 73 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 FAM223AQ8IWN6 122 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 MYOM2P54296 1465 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 TET3O43151 1660 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 CUL7Q14999 1698 aa-0.63□□□□□ -2.51
SEMA3A-207ENST00000490883 NEBP20929 6669 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 ACANP16112 2415 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 GAPVD1Q14C86 1478 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 F6UZH7 168 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 MT4P47944 62 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 KRTAP20-2Q3LI61 65 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 RYR3Q15413 4870 aa-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 FLGP20930 4061 aaPredicted RBP-0.64□□□□□ -2.51
SEMA3A-207ENST00000490883 KDM5AP29375 1690 aaKnown RBP-0.65□□□□□ -2.51
SEMA3A-207ENST00000490883 DNAJC13O75165 2243 aa-0.65□□□□□ -2.51
SEMA3A-207ENST00000490883 TRBV7-4A0A0J9YYF1 115 aa-0.65□□□□□ -2.51
SEMA3A-207ENST00000490883 SPRR2BP35325 72 aa-0.65□□□□□ -2.51
SEMA3A-207ENST00000490883 UBA52P62987 128 aaKnown RBP-0.65□□□□□ -2.51
SEMA3A-207ENST00000490883 MAGI1Q96QZ7 1491 aaPredicted RBP-0.66□□□□□ -2.51
SEMA3A-207ENST00000490883 CORTO00230 105 aa-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 UBE2D3P61077 147 aa-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 UBE2D2P62837 147 aa-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 FLNBO75369 2602 aaKnown RBP-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 SCAPERQ9BY12 1400 aa-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 NBEAL1Q6ZS30 2694 aa-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 SETD2Q9BYW2 2564 aaPredicted RBP-0.66□□□□□ -2.52
SEMA3A-207ENST00000490883 EHBP1L1Q8N3D4 1523 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 LINC00959A0A1B0GUT2 108 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 GNG4P50150 75 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 Q0VG73 95 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 USH2AO75445 5202 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 MAP1AP78559 2803 aaPredicted RBP-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 RYR1P21817 5038 aa-0.67□□□□□ -2.52
SEMA3A-207ENST00000490883 MANBALQ9NQG1 85 aa-0.68□□□□□ -2.52
SEMA3A-207ENST00000490883 PPP3R1P63098 170 aa-0.69□□□□□ -2.52
SEMA3A-207ENST00000490883 SVBPQ8N300 66 aa-0.69□□□□□ -2.52
SEMA3A-207ENST00000490883 LINC01600Q96MT4 127 aa-0.69□□□□□ -2.52
SEMA3A-207ENST00000490883 STARD9Q9P2P6 4700 aa-0.69□□□□□ -2.52
SEMA3A-207ENST00000490883 EPPK1P58107 5090 aaKnown RBP-0.69□□□□□ -2.52
SEMA3A-207ENST00000490883 COX6CP09669 75 aa-0.7□□□□□ -2.52
SEMA3A-207ENST00000490883 HIVEP1P15822 2718 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms