RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TRAV8-6A0A0B4J262 113 aa10.75□□□□□ -0.69
PCCB-218ENST00000490504 UBE2D1P51668 147 aa10.75□□□□□ -0.69
PCCB-218ENST00000490504 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
PCCB-218ENST00000490504 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
PCCB-218ENST00000490504 SH2D6Q7Z4S9 175 aa10.74□□□□□ -0.69
PCCB-218ENST00000490504 TTTY13Q9BZ97 58 aa10.74□□□□□ -0.69
PCCB-218ENST00000490504 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
PCCB-218ENST00000490504 HERC2O95714 4834 aa10.74□□□□□ -0.69
PCCB-218ENST00000490504 A0A096LPF7 62 aa10.73□□□□□ -0.69
PCCB-218ENST00000490504 TMEM223A0PJW6 202 aa10.73□□□□□ -0.69
PCCB-218ENST00000490504 RTL8CO15255 209 aa10.73□□□□□ -0.69
PCCB-218ENST00000490504 Q6ZR54 194 aa10.73□□□□□ -0.69
PCCB-218ENST00000490504 LINC00336Q6ZUF6 198 aa10.73□□□□□ -0.69
PCCB-218ENST00000490504 DNAH11Q96DT5 4516 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 TIRAPP58753 221 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 BATFQ16520 125 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 FAM19A3Q7Z5A8 133 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 GEMIN7Q9H840 131 aaKnown RBP10.72□□□□□ -0.69
PCCB-218ENST00000490504 HIGD1BQ9P298 99 aa10.72□□□□□ -0.69
PCCB-218ENST00000490504 PKD1P98161 4303 aa10.71□□□□□ -0.69
PCCB-218ENST00000490504 MYMXA0A1B0GTQ4 84 aa10.71□□□□□ -0.69
PCCB-218ENST00000490504 HINT1P49773 126 aaPredicted RBP10.71□□□□□ -0.69
PCCB-218ENST00000490504 SEC11AP67812 179 aa10.71□□□□□ -0.69
PCCB-218ENST00000490504 PKHD1P08F94 4074 aa10.71□□□□□ -0.7
PCCB-218ENST00000490504 H3BNG1 76 aa10.7□□□□□ -0.7
PCCB-218ENST00000490504 LEPROTO15243 131 aa10.7□□□□□ -0.7
PCCB-218ENST00000490504 IGLV5-45A0A087WSX0 123 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 HERVK_113P63121 156 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 MPV17L2Q567V2 206 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 LINC00469Q8N7U9 141 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 TRAV13-1A0A0B4J241 112 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 A0A1B0GVY2 172 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 ZNF815PA8K554 130 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 HSD52Q0P140 79 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 LINC00588Q9Y4M8 146 aa10.69□□□□□ -0.7
PCCB-218ENST00000490504 KIAA1109Q2LD37 5005 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 A0A1B0GUV1 79 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 TMEM262E9PQX1 116 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 H3BRM9 83 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 J3QQQ9 107 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 CCL18P55774 89 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 LINC00242Q5T6M2 205 aa10.68□□□□□ -0.7
PCCB-218ENST00000490504 LGALS3P17931 250 aaKnown RBP10.67□□□□□ -0.7
PCCB-218ENST00000490504 BVES-AS1Q5T3Y7 98 aa10.67□□□□□ -0.7
PCCB-218ENST00000490504 RBX1P62877 108 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 COX6A2Q02221 97 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 LELP1Q5T871 98 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 CDKN2A-AS1Q9UH64 79 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 IGHV3-64A0A075B6Q5 118 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 IGHV1-58A0A0C4DH39 117 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 COL5A1-AS1Q5SY13 56 aa10.66□□□□□ -0.7
PCCB-218ENST00000490504 SPINK8P0C7L1 97 aa10.65□□□□□ -0.7
PCCB-218ENST00000490504 IGHV3-30-3P0DP02 117 aa10.65□□□□□ -0.7
PCCB-218ENST00000490504 C1orf134Q5TEV5 83 aa10.65□□□□□ -0.7
PCCB-218ENST00000490504 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
PCCB-218ENST00000490504 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
PCCB-218ENST00000490504 ESRGQ1W209 222 aa10.63□□□□□ -0.71
PCCB-218ENST00000490504 SCGB1D4Q6XE38 83 aa10.63□□□□□ -0.71
PCCB-218ENST00000490504 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
PCCB-218ENST00000490504 TAL2Q16559 108 aa10.62□□□□□ -0.71
PCCB-218ENST00000490504 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
PCCB-218ENST00000490504 Q9H8V8 135 aa10.62□□□□□ -0.71
PCCB-218ENST00000490504 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
PCCB-218ENST00000490504 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
PCCB-218ENST00000490504 LINC00959A0A1B0GUT2 108 aa10.6□□□□□ -0.71
PCCB-218ENST00000490504 HIST1H4GQ99525 98 aa10.6□□□□□ -0.71
PCCB-218ENST00000490504 SMIM1B2RUZ4 78 aa10.59□□□□□ -0.71
PCCB-218ENST00000490504 CCL25O15444 150 aa10.59□□□□□ -0.71
PCCB-218ENST00000490504 SS18Q15532 418 aa10.59□□□□□ -0.71
PCCB-218ENST00000490504 C6orf223Q8N319 242 aa10.59□□□□□ -0.71
PCCB-218ENST00000490504 GCSHP23434 173 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 CEND1Q8N111 149 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 A0A1B0GV90 55 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 ANGP03950 147 aaKnown RBP10.58□□□□□ -0.72
PCCB-218ENST00000490504 TNP2Q05952 138 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
PCCB-218ENST00000490504 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
PCCB-218ENST00000490504 A6NDN8 102 aa10.57□□□□□ -0.72
PCCB-218ENST00000490504 Q8N3U1 123 aa10.57□□□□□ -0.72
PCCB-218ENST00000490504 SPANXB1Q9NS25 103 aaPredicted RBP10.57□□□□□ -0.72
PCCB-218ENST00000490504 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
PCCB-218ENST00000490504 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
PCCB-218ENST00000490504 LRP1BQ9NZR2 4599 aa10.56□□□□□ -0.72
PCCB-218ENST00000490504 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 FXYD2P54710 66 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 REG3AQ06141 175 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 RYR1P21817 5038 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 A0A087WZ39 114 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 NDUFA1O15239 70 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 PTTG1IPP53801 180 aa10.55□□□□□ -0.72
PCCB-218ENST00000490504 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCCB-218ENST00000490504 XCL1P47992 114 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms