RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
CD40-206ENST00000489304 HSD52Q0P140 79 aa12.36□□□□□ -0.43
CD40-206ENST00000489304 BATFQ16520 125 aa12.36□□□□□ -0.43
CD40-206ENST00000489304 MEGF8Q7Z7M0 2845 aa12.36□□□□□ -0.43
CD40-206ENST00000489304 BVES-AS1Q5T3Y7 98 aa12.35□□□□□ -0.43
CD40-206ENST00000489304 IGKV3OR2-268A0A0C4DH90 116 aa12.34□□□□□ -0.43
CD40-206ENST00000489304 IGLV5-39A0A0G2JS06 123 aa12.34□□□□□ -0.43
CD40-206ENST00000489304 CCL25O15444 150 aa12.34□□□□□ -0.43
CD40-206ENST00000489304 Q8N3U1 123 aa12.34□□□□□ -0.43
CD40-206ENST00000489304 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.44
CD40-206ENST00000489304 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
CD40-206ENST00000489304 ESRGQ1W209 222 aa12.33□□□□□ -0.44
CD40-206ENST00000489304 C15orf53Q8NAA6 179 aa12.33□□□□□ -0.44
CD40-206ENST00000489304 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
CD40-206ENST00000489304 SS18Q15532 418 aa12.32□□□□□ -0.44
CD40-206ENST00000489304 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CD40-206ENST00000489304 IGHV3OR16-9A0A0B4J2B5 98 aa12.31□□□□□ -0.44
CD40-206ENST00000489304 TAL2Q16559 108 aa12.31□□□□□ -0.44
CD40-206ENST00000489304 SCGB1D4Q6XE38 83 aa12.31□□□□□ -0.44
CD40-206ENST00000489304 COL5A1-AS1Q5SY13 56 aa12.31□□□□□ -0.44
CD40-206ENST00000489304 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
CD40-206ENST00000489304 IGLL5B9A064 214 aa12.29□□□□□ -0.44
CD40-206ENST00000489304 REG3AQ06141 175 aa12.29□□□□□ -0.44
CD40-206ENST00000489304 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
CD40-206ENST00000489304 A0A087WZ39 114 aa12.28□□□□□ -0.44
CD40-206ENST00000489304 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
CD40-206ENST00000489304 NDUFA12Q9UI09 145 aa12.28□□□□□ -0.44
CD40-206ENST00000489304 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
CD40-206ENST00000489304 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
CD40-206ENST00000489304 C10orf126Q8N4M7 172 aa12.27□□□□□ -0.45
CD40-206ENST00000489304 HIST1H4GQ99525 98 aa12.27□□□□□ -0.45
CD40-206ENST00000489304 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
CD40-206ENST00000489304 CEND1Q8N111 149 aa12.26□□□□□ -0.45
CD40-206ENST00000489304 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
CD40-206ENST00000489304 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 NDUFA1O15239 70 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 XCL1P47992 114 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 LINC01561Q8N1V8 128 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 GCSHP23434 173 aa12.25□□□□□ -0.45
CD40-206ENST00000489304 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
CD40-206ENST00000489304 C5orf38Q86SI9 138 aa12.24□□□□□ -0.45
CD40-206ENST00000489304 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
CD40-206ENST00000489304 DYNC2H1Q8NCM8 4307 aaKnown RBP12.24□□□□□ -0.45
CD40-206ENST00000489304 ENHOQ6UWT2 76 aa12.23□□□□□ -0.45
CD40-206ENST00000489304 FXYD2P54710 66 aa12.23□□□□□ -0.45
CD40-206ENST00000489304 A6NDN8 102 aa12.22□□□□□ -0.45
CD40-206ENST00000489304 SRSF9Q13242 221 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD40-206ENST00000489304 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
CD40-206ENST00000489304 COX7B2Q8TF08 81 aa12.22□□□□□ -0.45
CD40-206ENST00000489304 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
CD40-206ENST00000489304 Q9H8V8 135 aa12.21□□□□□ -0.45
CD40-206ENST00000489304 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 TMEM238C9JI98 176 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 LITAFQ99732 161 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 A0A1B0GV90 55 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 TIMM17BO60830 172 aa12.2□□□□□ -0.46
CD40-206ENST00000489304 K7EP13 123 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 COX7A2LO14548 114 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 CRPP02741 224 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 CCL18P55774 89 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 FOXI1Q12951 378 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 APLNQ9ULZ1 77 aa12.19□□□□□ -0.46
CD40-206ENST00000489304 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
CD40-206ENST00000489304 HERV-K104P63124 156 aa12.18□□□□□ -0.46
CD40-206ENST00000489304 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
CD40-206ENST00000489304 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 MIAQ16674 131 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
CD40-206ENST00000489304 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
CD40-206ENST00000489304 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
CD40-206ENST00000489304 Q6ZVH6 145 aa12.15□□□□□ -0.46
CD40-206ENST00000489304 Q8IZM0 81 aa12.15□□□□□ -0.46
CD40-206ENST00000489304 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
CD40-206ENST00000489304 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 CIRBPQ14011 172 aaKnown RBP12.14□□□□□ -0.47
CD40-206ENST00000489304 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 A0A1B0GWB2 263 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 A6NJY4 79 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 SFTA2Q6UW10 78 aa12.14□□□□□ -0.47
CD40-206ENST00000489304 NHP2Q9NX24 153 aaKnown RBP12.14□□□□□ -0.47
CD40-206ENST00000489304 PLECQ15149 4684 aaKnown RBP12.13□□□□□ -0.47
CD40-206ENST00000489304 NUPR2A6NF83 97 aa12.13□□□□□ -0.47
CD40-206ENST00000489304 MALP21145 153 aa12.13□□□□□ -0.47
CD40-206ENST00000489304 C6orf226Q5I0X4 101 aa12.13□□□□□ -0.47
CD40-206ENST00000489304 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
CD40-206ENST00000489304 PRSS2P07478 247 aa12.12□□□□□ -0.47
CD40-206ENST00000489304 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
CD40-206ENST00000489304 MUSTN1Q8IVN3 82 aa12.12□□□□□ -0.47
CD40-206ENST00000489304 KLK5Q9Y337 293 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms