RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261		A0A1W2PPM0	123 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	GAGE10	A6NGK3	116 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261		H3BUT2	72 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	KRTAP10-11	P60412	298 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	RPL24	P83731	157 aa	Known RBP	7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	GAGE6	Q13070	117 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	CIRBP	Q14011	172 aa	Known RBP	7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	MRPL23	Q16540	153 aa	Known RBP	7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	RAB37	Q96AX2	223 aa		7.57	□□□□□ -1.2
ITSN1-231	ENST00000489261	TRAV8-3	A0A0A6YYJ7	113 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	IGLL5	B9A064	214 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	NDUFA1	O15239	70 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	SPINK8	P0C7L1	97 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	IFITM1	P13164	125 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	COX6A2	Q02221	97 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	LINC01561	Q8N1V8	128 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	COPS9	Q8WXC6	57 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	SPANXD	Q9BXN6	97 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	SPANXC	Q9NY87	97 aa		7.56	□□□□□ -1.2
ITSN1-231	ENST00000489261	IGHV3-64	A0A075B6Q5	118 aa		7.55	□□□□□ -1.2
ITSN1-231	ENST00000489261		H3BNG1	76 aa		7.55	□□□□□ -1.2
ITSN1-231	ENST00000489261	PRB2	P02812	416 aa	Predicted RBP	7.55	□□□□□ -1.2
ITSN1-231	ENST00000489261	HERV-K104	P63124	156 aa		7.55	□□□□□ -1.2
ITSN1-231	ENST00000489261	C10orf126	Q8N4M7	172 aa		7.55	□□□□□ -1.2
ITSN1-231	ENST00000489261	DNAH3	Q8TD57	4116 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	TMEM262	E9PQX1	116 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261		F5H768	121 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261		K7EP13	123 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261		K7EP34	96 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	DEFB4A	O15263	64 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	SS18	Q15532	418 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	SFTA2	Q6UW10	78 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	C11orf68	Q9H3H3	251 aa	Known RBP	7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	PPDPF	Q9H3Y8	114 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	ICOS	Q9Y6W8	199 aa		7.54	□□□□□ -1.2
ITSN1-231	ENST00000489261	TG	P01266	2768 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261	IGLV4-60	A0A075B6I1	120 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261	SMIM1	B2RUZ4	78 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261	LYRM7	Q5U5X0	104 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261	CELA1	Q9UNI1	258 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261	SPCS1	Q9Y6A9	102 aa		7.53	□□□□□ -1.2
ITSN1-231	ENST00000489261		A0A0B4J2C4	111 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261	LINC00959	A0A1B0GUT2	108 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261	RBX1	P62877	108 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261	LELP1	Q5T871	98 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261	MUSTN1	Q8IVN3	82 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261	MRAP	Q8TCY5	172 aa		7.52	□□□□□ -1.21
ITSN1-231	ENST00000489261		A0A087WZ39	114 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261		K7ERJ3	54 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	CFC1B	P0CG36	223 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	CFC1	P0CG37	223 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	MIA	Q16674	131 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	LITAF	Q99732	161 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261	PRO1854	Q9UHT4	67 aa		7.51	□□□□□ -1.21
ITSN1-231	ENST00000489261		K7EIL1	84 aa		7.5	□□□□□ -1.21
ITSN1-231	ENST00000489261		A4D1N5	150 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261	APOM	O95445	188 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261	PRSS2	P07478	247 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261	COX7B2	Q8TF08	81 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261	ZNF625	Q96I27	306 aa	Predicted RBP	7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261		Q9H8V8	135 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261	PGPEP1	Q9NXJ5	209 aa		7.49	□□□□□ -1.21
ITSN1-231	ENST00000489261		A0A096LPF7	62 aa		7.48	□□□□□ -1.21
ITSN1-231	ENST00000489261	HTN3	P15516	51 aa		7.48	□□□□□ -1.21
ITSN1-231	ENST00000489261	ERG28	Q9UKR5	140 aa		7.48	□□□□□ -1.21
ITSN1-231	ENST00000489261	TRBV20-1	A0A075B6N2	111 aa		7.47	□□□□□ -1.21
ITSN1-231	ENST00000489261	ADAMTSL4-AS1	Q5T5F5	129 aa		7.47	□□□□□ -1.21
ITSN1-231	ENST00000489261	NAA38	Q9BRA0	125 aa	Known RBP	7.47	□□□□□ -1.21
ITSN1-231	ENST00000489261	IGKV3OR2-268	A0A0C4DH90	116 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261		F8W1H4	67 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	TSPAN13	O95857	204 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	MEIG1	Q5JSS6	88 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	CD164L2	Q6UWJ8	174 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	LYPD5	Q6UWN5	251 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	SPATA25	Q9BR10	227 aa		7.46	□□□□□ -1.22
ITSN1-231	ENST00000489261	IGHV3-33	P01772	117 aa		7.45	□□□□□ -1.22
ITSN1-231	ENST00000489261	ANG	P03950	147 aa	Known RBP	7.45	□□□□□ -1.22
ITSN1-231	ENST00000489261	IBA57-AS1	B1ANH7	110 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	CXCL5	P42830	114 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	REG3A	Q06141	175 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	C6orf226	Q5I0X4	101 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	C5orf38	Q86SI9	138 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261		Q8IZM0	81 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	LINC00269	Q8N2A0	174 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	C11orf45	Q8TAV5	145 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	LINC00308	Q8TCZ7	52 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	RETN	Q9HD89	108 aa		7.44	□□□□□ -1.22
ITSN1-231	ENST00000489261	TRAV8-4	A0A0B4J246	113 aa		7.43	□□□□□ -1.22
ITSN1-231	ENST00000489261	COX7A2L	O14548	114 aa		7.43	□□□□□ -1.22
ITSN1-231	ENST00000489261	SCGB1C2	P0DMR2	95 aa		7.43	□□□□□ -1.22
ITSN1-231	ENST00000489261	B9D2	Q9BPU9	175 aa		7.43	□□□□□ -1.22
ITSN1-231	ENST00000489261	LOC107984156	A0A0G2JMH3	177 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261		A0A0J9YWU9	116 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261	TRBV30	A0A0K0K1B3	111 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261	XCL1	P47992	114 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261	DEFB121	Q5J5C9	76 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261	ARL17A	Q8IVW1	177 aa		7.42	□□□□□ -1.22
ITSN1-231	ENST00000489261	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms