RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 H3BQ15 152 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 SFT2D2O95562 160 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 COX6CP09669 75 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 RBP2P50120 134 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 KRTDAPP60985 99 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 UBE2D3P61077 147 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 UBE2D2P62837 147 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 LINC01558Q9Y6Z2 57 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 PTPRQQ9UMZ3 2332 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 LAMC1P11047 1609 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 PKDREJQ9NTG1 2253 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 USF3Q68DE3 2245 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 HMGXB3Q12766 1538 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 ARHGEF12Q9NZN5 1544 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 ABCC5O15440 1437 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
CD46-215ENST00000488596 TRAV30A0A087WSZ9 112 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 A0A0D9SFI3 127 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 MGPP08493 103 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 TRAPPC2P0DI81 140 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 TRAPPC2BP0DI82 140 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 S100A10P60903 97 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 Q6JHZ5 121 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 SFTA2Q6UW10 78 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 FAM223AQ8IWN6 122 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 CNFNQ9BYD5 112 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 LINC00472Q9H8W2 130 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 NXT2Q9NPJ8 142 aaKnown RBP0.23□□□□□ -2.37
CD46-215ENST00000488596 CDC42SE2Q9NRR3 84 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 FAIMQ9NVQ4 179 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 PRO1854Q9UHT4 67 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 PRO0255Q9UI72 69 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 ARL2-SNX15V9GYD0 113 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 URB1O60287 2271 aaKnown RBP0.23□□□□□ -2.37
CD46-215ENST00000488596 CHD6Q8TD26 2715 aa0.23□□□□□ -2.37
CD46-215ENST00000488596 GAPVD1Q14C86 1478 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 DNAJC13O75165 2243 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 XRN1Q8IZH2 1706 aaKnown RBP0.22□□□□□ -2.37
CD46-215ENST00000488596 COL4A6Q14031 1691 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 hADV29S1A0JD25 119 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 IGLC1P0CG04 106 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 S100A3P33764 101 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 SPCS1Q9Y6A9 102 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 PAPPAQ13219 1627 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 ADGRL2O95490 1459 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 SPTA1P02549 2419 aa0.22□□□□□ -2.37
CD46-215ENST00000488596 VPS8Q8N3P4 1428 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 NSD3Q9BZ95 1437 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 CLTCQ00610 1675 aaKnown RBP0.21□□□□□ -2.38
CD46-215ENST00000488596 ANKRD36A6QL64 1941 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 PTPN13Q12923 2485 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 FAM223BA6NKX1 122 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 M0R3E3 92 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 GNGT2O14610 69 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 BCE1O60756 84 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 SEC11AP67812 179 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 ACBD7Q8N6N7 88 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 AP4S1Q9Y587 144 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 PRDM15P57071 1507 aaPredicted RBP0.21□□□□□ -2.38
CD46-215ENST00000488596 MAGI1Q96QZ7 1491 aaPredicted RBP0.21□□□□□ -2.38
CD46-215ENST00000488596 MLH3Q9UHC1 1453 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 MARF1Q9Y4F3 1742 aaKnown RBP0.21□□□□□ -2.38
CD46-215ENST00000488596 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 HIVEP3Q5T1R4 2406 aa0.21□□□□□ -2.38
CD46-215ENST00000488596 NHSL1Q5SYE7 1610 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 ANKRD36BQ8N2N9 1353 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 TSC2P49815 1807 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 PAPPA2Q9BXP8 1791 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 MT-ATP8P03928 68 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 SAA2P0DJI9 122 aaPredicted RBP0.2□□□□□ -2.38
CD46-215ENST00000488596 UBA52P62987 128 aaKnown RBP0.2□□□□□ -2.38
CD46-215ENST00000488596 Q5BKY6 102 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 TMEM263Q8WUH6 116 aaKnown RBP0.2□□□□□ -2.38
CD46-215ENST00000488596 SPRR4Q96PI1 79 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 PMCHL2Q9BQD1 86 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 TP53AIP1Q9HCN2 124 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 ABCA2Q9BZC7 2435 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 C1orf167Q5SNV9 1468 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 ABCC10Q5T3U5 1492 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 TEX14Q8IWB6 1497 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 WNK2Q9Y3S1 2297 aa0.2□□□□□ -2.38
CD46-215ENST00000488596 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
CD46-215ENST00000488596 ATRQ13535 2644 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 VWFP04275 2813 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 A0A0G2JMZ2 1700 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 KNDC1Q76NI1 1749 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 MON2Q7Z3U7 1717 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 MYH4Q9Y623 1939 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 SHPRHQ149N8 1683 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 PPRC1Q5VV67 1664 aaKnown RBP0.19□□□□□ -2.38
CD46-215ENST00000488596 NLRP1Q9C000 1473 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 FXYD6-FXYD2A0A087WZ82 144 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 A0A0G2JND7 137 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 TRBV6-1A0A0K0K1D8 114 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 A0A1B0GWA3 101 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 I3L2K1 104 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms