RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 COX6A2Q02221 97 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 HSD52Q0P140 79 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 ESRGQ1W209 222 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
VAMP3-203ENST00000487194 STAB2Q8WWQ8 2551 aa4.21□□□□□ -1.73
VAMP3-203ENST00000487194 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 IGLL5B9A064 214 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 CRPP02741 224 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 SPINK8P0C7L1 97 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 REG3AQ06141 175 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 TAL2Q16559 108 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 SNHG12Q9BXW3 62 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
VAMP3-203ENST00000487194 PLECQ15149 4684 aaKnown RBP4.2□□□□□ -1.74
VAMP3-203ENST00000487194 IGHV3-64A0A075B6Q5 118 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 A0A087WZ39 114 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 TRAV8-3A0A0A6YYJ7 113 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 TRAV8-4A0A0B4J246 113 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
VAMP3-203ENST00000487194 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 MIAQ16674 131 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 LINC01556Q5JQF7 62 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 ZFAND6Q6FIF0 208 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 CD164L2Q6UWJ8 174 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 WFDC10BQ8IUB3 73 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 CHCHD10Q8WYQ3 142 aaPredicted RBP4.2□□□□□ -1.74
VAMP3-203ENST00000487194 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 NDUFA12Q9UI09 145 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 KLK12Q9UKR0 248 aa4.2□□□□□ -1.74
VAMP3-203ENST00000487194 DNAH1Q9P2D7 4330 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 NUPR2A6NF83 97 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 TMEM238C9JI98 176 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 COX7A2LO14548 114 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 EREGO14944 169 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 NDUFA1O15239 70 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 IGHV3-30P01768 117 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 IGHV3-33P01772 117 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 IGHV3-30-5P0DP03 117 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 XCL1P47992 114 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 HERV-K104P63124 156 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 BATFQ16520 125 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 COL5A1-AS1Q5SY13 56 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 BVES-AS1Q5T3Y7 98 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 HIST1H4GQ99525 98 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
VAMP3-203ENST00000487194 SPANXB1Q9NS25 103 aaPredicted RBP4.19□□□□□ -1.74
VAMP3-203ENST00000487194 KLK5Q9Y337 293 aaPredicted RBP4.19□□□□□ -1.74
VAMP3-203ENST00000487194 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
VAMP3-203ENST00000487194 A0A0J9YXY3 114 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 A6NDN8 102 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 APOMO95445 188 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 DNAH10OSP0CZ25 163 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 MALP21145 153 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 PTTG1IPP53801 180 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
VAMP3-203ENST00000487194 CIRBPQ14011 172 aaKnown RBP4.18□□□□□ -1.74
VAMP3-203ENST00000487194 Q6ZVH6 145 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 CEND1Q8N111 149 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 Q8N3U1 123 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 C10orf126Q8N4M7 172 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 TM2D2Q9BX73 214 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 LINC00588Q9Y4M8 146 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 RYR3Q15413 4870 aa4.18□□□□□ -1.74
VAMP3-203ENST00000487194 VPS13DQ5THJ4 4388 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 TMEM238LA0A1B0GVL6 79 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 GAGE12HA6NDE8 117 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 A6NJY4 79 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 K7EP13 123 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 TIMM17BO60830 172 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 PRSS2P07478 247 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 GCSHP23434 173 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 FOXI1Q12951 378 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 ENHOQ6UWT2 76 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 Q8IZM0 81 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 Q9H8V8 135 aa4.17□□□□□ -1.74
VAMP3-203ENST00000487194 DNAH7Q8WXX0 4024 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 CXCL5P42830 114 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 C6orf226Q5I0X4 101 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 CFAP161Q6P656 301 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 COPS9Q8WXC6 57 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 RMI2Q96E14 147 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
VAMP3-203ENST00000487194 C1orf43Q9BWL3 253 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 TOMM7Q9P0U1 55 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 APLNQ9ULZ1 77 aa4.16□□□□□ -1.74
VAMP3-203ENST00000487194 COL7A1Q02388 2944 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms