RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 NF1P21359 2839 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 AGRNO00468 2067 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 NDUFA1O15239 70 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 LINC00694P0DN24 101 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 MIAQ16674 131 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 DGAT2L7PQ6IED9 249 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 CEMP1Q6PRD7 247 aaPredicted RBP5□□□□□ -1.61
SMARCAL1-212ENST00000486983 ATP6V0E2Q8NHE4 81 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 NOP10Q9NPE3 64 aaKnown RBP5□□□□□ -1.61
SMARCAL1-212ENST00000486983 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
SMARCAL1-212ENST00000486983 INAFM1C9JVW0 142 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 H3BMG7 143 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 J3QR89 54 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 M0QXV9 152 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 APOMO95445 188 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 IFITM1P13164 125 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 FOXI1Q12951 378 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 NTM-AS1Q6ZSK4 140 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 LINC00612Q8N6U2 182 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 KIR2DL5BQ8NHK3 375 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 VPS25Q9BRG1 176 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 TMEM243Q9BU79 118 aa4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 NIPBLQ6KC79 2804 aaeCLIP4.99□□□□□ -1.61
SMARCAL1-212ENST00000486983 TLN2Q9Y4G6 2542 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGHV3-64A0A075B6Q5 118 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 TRAV8-3A0A0A6YYJ7 113 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 A4D1N5 150 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 SMIM9A6NGZ8 99 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGHV3-33P01772 117 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 RPL35AP18077 110 aaKnown RBP4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 KRTAP10-3P60369 221 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 LINC00242Q5T6M2 205 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 MUSTN1Q8IVN3 82 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 TMEM101Q96IK0 257 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 WFDC10AQ9H1F0 79 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 CDC42SE2Q9NRR3 84 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 CDKN2A-AS1Q9UH64 79 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 ACANP16112 2415 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 NACAE9PAV3 2078 aa4.98□□□□□ -1.61
SMARCAL1-212ENST00000486983 TEX48A0A1B0GUV7 120 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE12JA6NER3 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 UBE2L6O14933 153 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE7O76087 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 SPINK8P0C7L1 97 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE4Q13068 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 GAGE5Q13069 117 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 RNASE13Q5GAN3 156 aaKnown RBP4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 C9orf66Q5T8R8 295 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 LINC01600Q96MT4 127 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 ERG28Q9UKR5 140 aa4.97□□□□□ -1.61
SMARCAL1-212ENST00000486983 SONP18583 2426 aaKnown RBP4.96□□□□□ -1.61
SMARCAL1-212ENST00000486983 TRGV4A0A0C4DH28 118 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 SMIM1B2RUZ4 78 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 HERV-K104P63124 156 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 CIRBPQ14011 172 aaKnown RBP4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 WFDC2Q14508 124 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 CUBNO60494 3623 aa4.96□□□□□ -1.62
SMARCAL1-212ENST00000486983 TRBV6-8A0A0A6YYG3 113 aa4.95□□□□□ -1.62
SMARCAL1-212ENST00000486983 LYRM9A8MSI8 78 aa4.95□□□□□ -1.62
SMARCAL1-212ENST00000486983 F5H768 121 aa4.95□□□□□ -1.62
SMARCAL1-212ENST00000486983 SFTA2Q6UW10 78 aa4.95□□□□□ -1.62
SMARCAL1-212ENST00000486983 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
SMARCAL1-212ENST00000486983 TCL1BO95988 128 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 PCP4P48539 62 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 PSMB2P49721 201 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 COX6A2Q02221 97 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 ETDBQ3ZM63 59 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 ADAMTSL4-AS1Q5T5F5 129 aa4.94□□□□□ -1.62
SMARCAL1-212ENST00000486983 MTORP42345 2549 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 TRAV13-1A0A0B4J241 112 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 GAGE12HA6NDE8 117 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 CRLF1O75462 422 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 PRSS2P07478 247 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 APOC4P55056 127 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 CITED1Q99966 193 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 Q9H8V8 135 aa4.93□□□□□ -1.62
SMARCAL1-212ENST00000486983 NSD1Q96L73 2696 aaPredicted RBP4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 FN1P02751 2386 aaKnown RBP4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 SORL1Q92673 2214 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 HIVEP2P31629 2446 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 LOC100131303A0A0U1RQF7 123 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 A0A1B0GUV1 79 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 A8MZ25 164 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 TRIAP1O43715 76 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms