RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
HMGN1-216ENST00000486741 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
HMGN1-216ENST00000486741 TRACP01848 142 aa9.58□□□□□ -0.88
HMGN1-216ENST00000486741 NDUFV3P56181 108 aaKnown RBP9.58□□□□□ -0.88
HMGN1-216ENST00000486741 LINC00315P59091 139 aa9.58□□□□□ -0.88
HMGN1-216ENST00000486741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-216ENST00000486741 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 UBE2D4Q9Y2X8 147 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
HMGN1-216ENST00000486741 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
HMGN1-216ENST00000486741 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
HMGN1-216ENST00000486741 TCL1BO95988 128 aa9.56□□□□□ -0.88
HMGN1-216ENST00000486741 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
HMGN1-216ENST00000486741 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
HMGN1-216ENST00000486741 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
HMGN1-216ENST00000486741 IGLV1-51P01701 117 aa9.55□□□□□ -0.88
HMGN1-216ENST00000486741 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
HMGN1-216ENST00000486741 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
HMGN1-216ENST00000486741 GCN1Q92616 2671 aaKnown RBP9.55□□□□□ -0.88
HMGN1-216ENST00000486741 XGP55808 180 aa9.55□□□□□ -0.88
HMGN1-216ENST00000486741 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
HMGN1-216ENST00000486741 PIK3CD-AS1Q5SR53 167 aa9.54□□□□□ -0.88
HMGN1-216ENST00000486741 IGKV2D-24A0A075B6R9 120 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 PYGO1Q9Y3Y4 419 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 A0A096LNT2 108 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 COX7A2LO14548 114 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 DCHS2Q6V1P9 2916 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 LINC01620Q4KN68 170 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
HMGN1-216ENST00000486741 HRNRQ86YZ3 2850 aaPredicted RBP9.52□□□□□ -0.88
HMGN1-216ENST00000486741 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.88
HMGN1-216ENST00000486741 KLK9Q2XQG4 91 aa9.52□□□□□ -0.88
HMGN1-216ENST00000486741 MIAQ16674 131 aa9.52□□□□□ -0.89
HMGN1-216ENST00000486741 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
HMGN1-216ENST00000486741 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 J3KT08 172 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 Q8N2B8 174 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 POM121L12Q8N7R1 296 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 LINC00526Q96FQ7 95 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 UBR5O95071 2799 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-216ENST00000486741 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 FSHBP01225 129 aa9.51□□□□□ -0.89
HMGN1-216ENST00000486741 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
HMGN1-216ENST00000486741 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
HMGN1-216ENST00000486741 UBE2D3P61077 147 aa9.5□□□□□ -0.89
HMGN1-216ENST00000486741 UBE2D2P62837 147 aa9.5□□□□□ -0.89
HMGN1-216ENST00000486741 COX6A2Q02221 97 aa9.5□□□□□ -0.89
HMGN1-216ENST00000486741 NBEAL2Q6ZNJ1 2754 aa9.49□□□□□ -0.89
HMGN1-216ENST00000486741 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
HMGN1-216ENST00000486741 UBE2D1P51668 147 aa9.49□□□□□ -0.89
HMGN1-216ENST00000486741 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
HMGN1-216ENST00000486741 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
HMGN1-216ENST00000486741 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
HMGN1-216ENST00000486741 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
HMGN1-216ENST00000486741 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
HMGN1-216ENST00000486741 IGKV3D-7A0A0C4DH55 119 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 M0QXV9 152 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 PSCAO43653 123 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 A0A1B0GX51 115 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 TRIAP1O43715 76 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 TIRAPP58753 221 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 REG3AQ06141 175 aa9.47□□□□□ -0.89
HMGN1-216ENST00000486741 SPAG11BQ08648 103 aa9.46□□□□□ -0.89
HMGN1-216ENST00000486741 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.89
HMGN1-216ENST00000486741 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-216ENST00000486741 NCR3O14931 201 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 ADAMTSL4-AS1Q5T5F5 129 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 IGHV4-30-4P0DP06 118 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 RETNQ9HD89 108 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 LYRM9A8MSI8 78 aa9.45□□□□□ -0.9
HMGN1-216ENST00000486741 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
HMGN1-216ENST00000486741 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
HMGN1-216ENST00000486741 NDUFA1O15239 70 aa9.44□□□□□ -0.9
HMGN1-216ENST00000486741 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
HMGN1-216ENST00000486741 RBM3P98179 157 aaKnown RBP9.44□□□□□ -0.9
HMGN1-216ENST00000486741 LECT2O14960 151 aa9.43□□□□□ -0.9
HMGN1-216ENST00000486741 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
HMGN1-216ENST00000486741 FHL2Q14192 279 aa9.43□□□□□ -0.9
HMGN1-216ENST00000486741 AMELXQ99217 191 aa9.43□□□□□ -0.9
HMGN1-216ENST00000486741 FHL3Q13643 280 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms