RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 COL5A1-AS1Q5SY13 56 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 Q6ZTC4 211 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 IGLV4-60A0A075B6I1 120 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 BVES-AS1Q5T3Y7 98 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 RYR3Q15413 4870 aa10.06□□□□□ -0.8
POLR2J3-204ENST00000486319 LELP1Q5T871 98 aa10.06□□□□□ -0.8
POLR2J3-204ENST00000486319 TAL2Q16559 108 aa10.05□□□□□ -0.8
POLR2J3-204ENST00000486319 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
POLR2J3-204ENST00000486319 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
POLR2J3-204ENST00000486319 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
POLR2J3-204ENST00000486319 RBX1P62877 108 aa10.04□□□□□ -0.8
POLR2J3-204ENST00000486319 SCGB1D4Q6XE38 83 aa10.04□□□□□ -0.8
POLR2J3-204ENST00000486319 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
POLR2J3-204ENST00000486319 COX6A2Q02221 97 aa10.03□□□□□ -0.8
POLR2J3-204ENST00000486319 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.8
POLR2J3-204ENST00000486319 TRAV8-3A0A0A6YYJ7 113 aa10.02□□□□□ -0.8
POLR2J3-204ENST00000486319 SPINK8P0C7L1 97 aa10.02□□□□□ -0.8
POLR2J3-204ENST00000486319 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.8
POLR2J3-204ENST00000486319 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
POLR2J3-204ENST00000486319 LYSTQ99698 3801 aa10.01□□□□□ -0.81
POLR2J3-204ENST00000486319 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
POLR2J3-204ENST00000486319 CCL25O15444 150 aa10.01□□□□□ -0.81
POLR2J3-204ENST00000486319 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
POLR2J3-204ENST00000486319 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-204ENST00000486319 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
POLR2J3-204ENST00000486319 TRAV10A0A0B4J240 114 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 A6NDN8 102 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 SS18Q15532 418 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 CEND1Q8N111 149 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 HIST1H4GQ99525 98 aa10□□□□□ -0.81
POLR2J3-204ENST00000486319 IGLV5-39A0A0G2JS06 123 aa9.99□□□□□ -0.81
POLR2J3-204ENST00000486319 IGLL5B9A064 214 aa9.99□□□□□ -0.81
POLR2J3-204ENST00000486319 GCSHP23434 173 aa9.99□□□□□ -0.81
POLR2J3-204ENST00000486319 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
POLR2J3-204ENST00000486319 A0A1B0GV90 55 aa9.98□□□□□ -0.81
POLR2J3-204ENST00000486319 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
POLR2J3-204ENST00000486319 LY6G6CO95867 125 aa9.98□□□□□ -0.81
POLR2J3-204ENST00000486319 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-204ENST00000486319 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 LINC00476Q8WZB0 136 aa9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 RYR2Q92736 4967 aa9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 IGHV3OR16-9A0A0B4J2B5 98 aa9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
POLR2J3-204ENST00000486319 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
POLR2J3-204ENST00000486319 LINC00269Q8N2A0 174 aa9.96□□□□□ -0.82
POLR2J3-204ENST00000486319 C15orf53Q8NAA6 179 aa9.96□□□□□ -0.82
POLR2J3-204ENST00000486319 A0A087WZ39 114 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 TMEM238C9JI98 176 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 NDUFA1O15239 70 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 FXYD2P54710 66 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 REG3AQ06141 175 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 C10orf126Q8N4M7 172 aa9.95□□□□□ -0.82
POLR2J3-204ENST00000486319 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
POLR2J3-204ENST00000486319 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
POLR2J3-204ENST00000486319 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
POLR2J3-204ENST00000486319 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 A6NJY4 79 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 TAX1BP3O14907 124 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 XCL1P47992 114 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 ESRGQ1W209 222 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 Q8N3U1 123 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 CD164L2Q6UWJ8 174 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
POLR2J3-204ENST00000486319 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 TIMM17BO60830 172 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 HERV-K104P63124 156 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 Q9H8V8 135 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
POLR2J3-204ENST00000486319 K7EP13 123 aa9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 Q6ZVH6 145 aa9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 CHCHD10Q8WYQ3 142 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 NHP2Q9NX24 153 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 KLK12Q9UKR0 248 aa9.9□□□□□ -0.82
POLR2J3-204ENST00000486319 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.83
POLR2J3-204ENST00000486319 IGHV3-33P01772 117 aa9.89□□□□□ -0.83
POLR2J3-204ENST00000486319 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
POLR2J3-204ENST00000486319 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
POLR2J3-204ENST00000486319 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
POLR2J3-204ENST00000486319 CRPP02741 224 aa9.88□□□□□ -0.83
POLR2J3-204ENST00000486319 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-204ENST00000486319 LITAFQ99732 161 aa9.88□□□□□ -0.83
POLR2J3-204ENST00000486319 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
POLR2J3-204ENST00000486319 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 COX7A2LO14548 114 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms