RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A0A0D9SFI3 127 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 SYS1-DBNDD2H3BUS1 97 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 K7EP34 96 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 M0R3E3 92 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 NDUFC1O43677 76 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 GYPAP02724 150 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 PRH1P02810 166 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 PYY3Q5JQD4 70 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 MYO7BQ6PIF6 2116 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 SERP2Q8N6R1 65 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 SPRR4Q96PI1 79 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 DIP2CQ9Y2E4 1556 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
VPS13A-211ENST00000484581 GAPVD1Q14C86 1478 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 A0A1B0GWA3 101 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 FAM223BA6NKX1 122 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 PMCHL1Q16048 86 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 PSMG4Q5JS54 123 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 Q6JHZ5 121 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 FDCSPQ8NFU4 85 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 S100A16Q96FQ6 103 aaKnown RBP0.8□□□□□ -2.28
VPS13A-211ENST00000484581 C20orf78Q9BR46 151 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 CACNA1AO00555 2505 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 ADGRL2O95490 1459 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 MLH3Q9UHC1 1453 aa0.8□□□□□ -2.28
VPS13A-211ENST00000484581 FAM208BQ5VWN6 2430 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 TOP2BQ02880 1626 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 TRBV7-7A0A0K0K1E9 115 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 C10orf142B7Z368 130 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 S100A3P33764 101 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 SPINK6Q6UWN8 80 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 TRGV9Q99603 122 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
VPS13A-211ENST00000484581 TROQ12816 1431 aaPredicted RBP0.79□□□□□ -2.28
VPS13A-211ENST00000484581 PRDM15P57071 1507 aaPredicted RBP0.79□□□□□ -2.28
VPS13A-211ENST00000484581 COL4A6Q14031 1691 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 BDP1A6H8Y1 2624 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 ZNF720Q7Z2F6 126 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 TMEM263Q8WUH6 116 aaKnown RBP0.78□□□□□ -2.28
VPS13A-211ENST00000484581 CNFNQ9BYD5 112 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
VPS13A-211ENST00000484581 EDC4Q6P2E9 1401 aaKnown RBP0.78□□□□□ -2.28
VPS13A-211ENST00000484581 LRP6O75581 1613 aa0.78□□□□□ -2.29
VPS13A-211ENST00000484581 A0A087WVE0 104 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 SAA2P0DJI9 122 aaPredicted RBP0.77□□□□□ -2.29
VPS13A-211ENST00000484581 ETDBQ3ZM63 59 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 S100A13Q99584 98 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 SMR3AQ99954 134 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 HIGD1BQ9P298 99 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 SPCS1Q9Y6A9 102 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 UACAQ9BZF9 1416 aa0.77□□□□□ -2.29
VPS13A-211ENST00000484581 PKD1L2Q7Z442 2459 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 PDCD11Q14690 1871 aaKnown RBP0.76□□□□□ -2.29
VPS13A-211ENST00000484581 AKAP12Q02952 1782 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 ARHGEF12Q9NZN5 1544 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 TRBV25-1A0A075B6N4 114 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 C7orf77A4D0Y5 90 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 F8WEM9 126 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 H3BQF6 201 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 H7BZZ5 65 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 SMIM11AP58511 58 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 LCN9Q8WX39 176 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 F8P00451 2351 aa0.76□□□□□ -2.29
VPS13A-211ENST00000484581 BCE1O60756 84 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 LEPROTL1O95214 131 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 ADIRFQ15847 76 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 TDRG1Q3Y452 100 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 ALKAL2Q6UX46 152 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 DEFB107AQ8IZN7 70 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 PLCE1Q9P212 2302 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 SCRIBQ14160 1630 aa0.75□□□□□ -2.29
VPS13A-211ENST00000484581 ERCC6L2Q5T890 1561 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 EPRSP07814 1512 aaKnown RBP0.74□□□□□ -2.29
VPS13A-211ENST00000484581 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 ABCA12Q86UK0 2595 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 PLIN4Q96Q06 1357 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 D6R8Y8 96 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 GNGT1P63211 74 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 MUSTN1Q8IVN3 82 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 PSENENQ9NZ42 101 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 ANKRD26Q9UPS8 1709 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 MARF1Q9Y4F3 1742 aaKnown RBP0.74□□□□□ -2.29
VPS13A-211ENST00000484581 ABCC3O15438 1527 aa0.74□□□□□ -2.29
VPS13A-211ENST00000484581 MED14O60244 1454 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 ATP10BO94823 1461 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 NRXN1Q9ULB1 1477 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 MON2Q7Z3U7 1717 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 TPRP12270 2363 aaKnown RBP0.73□□□□□ -2.29
VPS13A-211ENST00000484581 ARMS2P0C7Q2 107 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 LINC01600Q96MT4 127 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 LAMC1P11047 1609 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 GOLGA4Q13439 2230 aaKnown RBP0.73□□□□□ -2.29
VPS13A-211ENST00000484581 ARHGAP35Q9NRY4 1499 aa0.73□□□□□ -2.29
VPS13A-211ENST00000484581 CEP162Q5TB80 1403 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 SCN7AQ01118 1682 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
VPS13A-211ENST00000484581 KANTRA0A1W2PQU2 76 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 IQCF6A8MYZ5 107 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms