RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 IGHV3-53P01767 116 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 TIRAPP58753 221 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 DGAT2L7PQ6IED9 249 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 C11orf72Q8NBR9 251 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 IGLV5-39A0A0G2JS06 123 aa9.52□□□□□ -0.88
PDZRN3-208ENST00000479530 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.88
PDZRN3-208ENST00000479530 ITPR2Q14571 2701 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 WFDC11Q8NEX6 87 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 XCL2Q9UBD3 114 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 ZNF415Q09FC8 603 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
PDZRN3-208ENST00000479530 ANK3Q12955 4377 aaKnown RBP9.51□□□□□ -0.89
PDZRN3-208ENST00000479530 DYNLRB2Q8TF09 96 aa9.51□□□□□ -0.89
PDZRN3-208ENST00000479530 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
PDZRN3-208ENST00000479530 A8MTW9 85 aa9.5□□□□□ -0.89
PDZRN3-208ENST00000479530 PRIMA1Q86XR5 153 aa9.5□□□□□ -0.89
PDZRN3-208ENST00000479530 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
PDZRN3-208ENST00000479530 Q9HAA7 133 aa9.49□□□□□ -0.89
PDZRN3-208ENST00000479530 ESM1Q9NQ30 184 aa9.49□□□□□ -0.89
PDZRN3-208ENST00000479530 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
PDZRN3-208ENST00000479530 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-208ENST00000479530 HERVK_113P63121 156 aa9.48□□□□□ -0.89
PDZRN3-208ENST00000479530 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
PDZRN3-208ENST00000479530 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
PDZRN3-208ENST00000479530 PDZD2O15018 2839 aa9.47□□□□□ -0.89
PDZRN3-208ENST00000479530 ACYP1P07311 99 aa9.47□□□□□ -0.89
PDZRN3-208ENST00000479530 RS1O15537 224 aa9.46□□□□□ -0.89
PDZRN3-208ENST00000479530 F5H768 121 aa9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 LRRC75A-AS1Q8N1F1 130 aa9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 DNAJC9-AS1A6NH13 148 aa9.46□□□□□ -0.9
PDZRN3-208ENST00000479530 SDIM1Q6ZPB5 146 aa9.45□□□□□ -0.9
PDZRN3-208ENST00000479530 IMUPQ9GZP8 106 aa9.45□□□□□ -0.9
PDZRN3-208ENST00000479530 TRACP01848 142 aa9.45□□□□□ -0.9
PDZRN3-208ENST00000479530 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
PDZRN3-208ENST00000479530 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
PDZRN3-208ENST00000479530 J3KT08 172 aa9.44□□□□□ -0.9
PDZRN3-208ENST00000479530 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
PDZRN3-208ENST00000479530 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
PDZRN3-208ENST00000479530 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
PDZRN3-208ENST00000479530 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
PDZRN3-208ENST00000479530 INSP01308 110 aa9.43□□□□□ -0.9
PDZRN3-208ENST00000479530 C9orf153Q5TBE3 101 aa9.43□□□□□ -0.9
PDZRN3-208ENST00000479530 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
PDZRN3-208ENST00000479530 NBEAL2Q6ZNJ1 2754 aa9.43□□□□□ -0.9
PDZRN3-208ENST00000479530 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
PDZRN3-208ENST00000479530 CCL24O00175 119 aa9.42□□□□□ -0.9
PDZRN3-208ENST00000479530 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
PDZRN3-208ENST00000479530 Q6ZTI0 123 aa9.42□□□□□ -0.9
PDZRN3-208ENST00000479530 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
PDZRN3-208ENST00000479530 A0A087WYN8 130 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 A0A1B0GX51 115 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 STHQ8IWL8 128 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 HELZ2Q9BYK8 2649 aaKnown RBP9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 MALP21145 153 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
PDZRN3-208ENST00000479530 FN1P02751 2386 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-208ENST00000479530 OR13C6PQ8NH95 151 aa9.4□□□□□ -0.9
PDZRN3-208ENST00000479530 IGKV3OR2-268A0A0C4DH90 116 aa9.4□□□□□ -0.91
PDZRN3-208ENST00000479530 VWFP04275 2813 aa9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 K7EQD1 137 aa9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 RPL36AP83881 106 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 FAM222AQ5U5X8 452 aa9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 RPL36ALQ969Q0 106 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
PDZRN3-208ENST00000479530 UQCRQO14949 82 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 ATP5G1P05496 136 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 CRPP02741 224 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 RPS28P62857 69 aaKnown RBP9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 SMIM11BQ8TCY0 68 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 NOTCH2Q04721 2471 aa9.38□□□□□ -0.91
PDZRN3-208ENST00000479530 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 INAFM2P0DMQ5 153 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 LINC01006Q8NI28 216 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
PDZRN3-208ENST00000479530 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
PDZRN3-208ENST00000479530 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
PDZRN3-208ENST00000479530 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
PDZRN3-208ENST00000479530 CXCL5P42830 114 aa9.35□□□□□ -0.91
PDZRN3-208ENST00000479530 UNC79Q9P2D8 2635 aa9.35□□□□□ -0.91
PDZRN3-208ENST00000479530 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms