RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PHRF1Q9P1Y6 1649 aaKnown RBP0.86□□□□□ -2.27
VPS50-213ENST00000477572 KIAA0586Q9BVV6 1533 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 C5P01031 1676 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 A0A087WSZ3 146 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 PIGBOS1A0A0B4J2F0 54 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 CXorf51AA0A1B0GTR3 108 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 A6NIN4 97 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 FXYD1O00168 92 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 HCRTO43612 131 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 ACYP1P07311 99 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 GCHFRP30047 84 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 SPINT3P49223 89 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 DEFB121Q5J5C9 76 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 SMIM5Q71RC9 77 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 C20orf197Q8N268 126 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 IFI27L1Q96BM0 104 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 FAM167A-AS1Q96KT0 104 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 FAM103A1Q9BTL3 118 aaKnown RBP0.85□□□□□ -2.27
VPS50-213ENST00000477572 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 C14orf132Q9NPU4 83 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 PSENENQ9NZ42 101 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 NRXN2Q9P2S2 1712 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 PRO1854Q9UHT4 67 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 ANKRD50Q9ULJ7 1429 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 BCORQ6W2J9 1755 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 PAPPA2Q9BXP8 1791 aa0.85□□□□□ -2.27
VPS50-213ENST00000477572 SHPRHQ149N8 1683 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 MAST1Q9Y2H9 1570 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 TRBV7-3A0A075B6L6 115 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 TRBV25-1A0A075B6N4 114 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 TRAV10A0A0B4J240 114 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 TRAV12-3A0A0B4J271 114 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 MYMXA0A1B0GTQ4 84 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 LOC285095A0A1B0GVY8 99 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 TMEM30CPA0ZSE6 113 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 CHKB-CPT1BH3BT56 60 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 BCE1O60756 84 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 ERC2-IT1O76042 136 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 HMGN2P05204 90 aaKnown RBP0.84□□□□□ -2.27
VPS50-213ENST00000477572 MIFP14174 115 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 UBE2D1P51668 147 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 EDDM3BP56851 147 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 SMIM11AP58511 58 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 C10orf128Q5T292 105 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.84□□□□□ -2.27
VPS50-213ENST00000477572 ZNF818PQ6ZRF7 136 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 C6orf201Q7Z4U5 140 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 BAGE2Q86Y30 109 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 CLECL1Q8IZS7 167 aa0.84□□□□□ -2.27
VPS50-213ENST00000477572 USP32Q8NFA0 1604 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 CICQ96RK0 1608 aaPredicted RBP0.84□□□□□ -2.28
VPS50-213ENST00000477572 CD163L1Q9NR16 1453 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 COL4A5P29400 1685 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 NHSQ6T4R5 1651 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 RREB1Q92766 1687 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 EHBP1L1Q8N3D4 1523 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 RICTORQ6R327 1708 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 FMN2Q9NZ56 1722 aa0.84□□□□□ -2.28
VPS50-213ENST00000477572 NOTCH1P46531 2555 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 LRP6O75581 1613 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 IGLV3-32A0A0A0MS00 114 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 A0A1B0GWA3 101 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 CLPSL1A2RUU4 121 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 C2orf70A6NJV1 201 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 ZNF815PA8K554 130 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 SNRPGP15A8MWD9 76 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 TMEM14DPA8MWL7 114 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 H3BVH4 76 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 BAALC-AS2P0C853 105 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 S100A3P33764 101 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 PLGLAQ15195 96 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 SPANXN5Q5MJ07 72 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 Q6JHZ5 121 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 KRTAP26-1Q6PEX3 210 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 ZNF833PQ6ZTB9 187 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 TMEM254Q8TBM7 123 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 LIMD2Q9BT23 127 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 DYNLRB1Q9NP97 96 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 CDC42SE2Q9NRR3 84 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 NDUFA4L2Q9NRX3 87 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 TMEM14BQ9NUH8 114 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 GNG13Q9P2W3 67 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 C22orf24Q9Y442 160 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 C3P01024 1663 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 NRAPQ86VF7 1730 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 EFCAB6Q5THR3 1501 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 ZMYM4Q5VZL5 1548 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 DLEC1Q9Y238 1755 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 ADGRB2O60241 1585 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 SPAG17Q6Q759 2223 aa0.83□□□□□ -2.28
VPS50-213ENST00000477572 KDM6BO15054 1643 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 DOT1LQ8TEK3 1739 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 IGHV3-64A0A075B6Q5 118 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 TRAV23DV6A0A075B6W5 121 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 TRBV6-7A0A0A0MS04 114 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 TRAV12-1A0A0B4J245 112 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms