RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
CCNL1-218ENST00000476744 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 HIST2H2BDQ6DRA6 164 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 Q6ZTI0 123 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 ATP6V0E2Q8NHE4 81 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 KIR2DL5BQ8NHK3 375 aa5.41□□□□□ -1.54
CCNL1-218ENST00000476744 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
CCNL1-218ENST00000476744 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
CCNL1-218ENST00000476744 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
CCNL1-218ENST00000476744 G3V4G9 280 aa5.4□□□□□ -1.54
CCNL1-218ENST00000476744 NDUFA1O15239 70 aa5.4□□□□□ -1.54
CCNL1-218ENST00000476744 HERVK_113P63121 156 aa5.4□□□□□ -1.54
CCNL1-218ENST00000476744 DEFB104AQ8WTQ1 72 aa5.4□□□□□ -1.54
CCNL1-218ENST00000476744 JMJD1CQ15652 2540 aa5.4□□□□□ -1.55
CCNL1-218ENST00000476744 HIVEP2P31629 2446 aa5.39□□□□□ -1.55
CCNL1-218ENST00000476744 TRBV20-1A0A075B6N2 111 aa5.39□□□□□ -1.55
CCNL1-218ENST00000476744 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
CCNL1-218ENST00000476744 CEMP1Q6PRD7 247 aaPredicted RBP5.39□□□□□ -1.55
CCNL1-218ENST00000476744 WFDC10AQ9H1F0 79 aa5.39□□□□□ -1.55
CCNL1-218ENST00000476744 PRO1854Q9UHT4 67 aa5.39□□□□□ -1.55
CCNL1-218ENST00000476744 FLNBO75369 2602 aaKnown RBP5.39□□□□□ -1.55
CCNL1-218ENST00000476744 NOTCH3Q9UM47 2321 aa5.39□□□□□ -1.55
CCNL1-218ENST00000476744 IGHV3-38A0A0C4DH36 116 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 A4D1N5 150 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 SMIM9A6NGZ8 99 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 F5H768 121 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 LY6G6DO95868 133 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 IGHV3-33P01772 117 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 IFITM1P13164 125 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 MIAQ16674 131 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 LINC00242Q5T6M2 205 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.38□□□□□ -1.55
CCNL1-218ENST00000476744 NOP10Q9NPE3 64 aaKnown RBP5.38□□□□□ -1.55
CCNL1-218ENST00000476744 CDC42SE2Q9NRR3 84 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
CCNL1-218ENST00000476744 TRAV8-3A0A0A6YYJ7 113 aa5.37□□□□□ -1.55
CCNL1-218ENST00000476744 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
CCNL1-218ENST00000476744 H3BMG7 143 aa5.37□□□□□ -1.55
CCNL1-218ENST00000476744 GEMIN7Q9H840 131 aaKnown RBP5.37□□□□□ -1.55
CCNL1-218ENST00000476744 CDKN2A-AS1Q9UH64 79 aa5.37□□□□□ -1.55
CCNL1-218ENST00000476744 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 TEX48A0A1B0GUV7 120 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 APOMO95445 188 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 C9orf66Q5T8R8 295 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 MUSTN1Q8IVN3 82 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
CCNL1-218ENST00000476744 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 TMEM243Q9BU79 118 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 C2CD3Q4AC94 2353 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 MAST4O15021 2626 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 OTOGQ6ZRI0 2925 aa5.36□□□□□ -1.55
CCNL1-218ENST00000476744 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
CCNL1-218ENST00000476744 RPL35AP18077 110 aaKnown RBP5.35□□□□□ -1.55
CCNL1-218ENST00000476744 COX6A2Q02221 97 aa5.35□□□□□ -1.55
CCNL1-218ENST00000476744 RNASE13Q5GAN3 156 aaKnown RBP5.35□□□□□ -1.55
CCNL1-218ENST00000476744 DGAT2L7PQ6IED9 249 aa5.35□□□□□ -1.55
CCNL1-218ENST00000476744 SMR3AQ99954 134 aa5.35□□□□□ -1.55
CCNL1-218ENST00000476744 CITED1Q99966 193 aa5.35□□□□□ -1.55
CCNL1-218ENST00000476744 SETD2Q9BYW2 2564 aaPredicted RBP5.35□□□□□ -1.55
CCNL1-218ENST00000476744 HECTD1Q9ULT8 2610 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 IGHV3-64A0A075B6Q5 118 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 TRBV6-8A0A0A6YYG3 113 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE12JA6NER3 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 LYRM9A8MSI8 78 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE7O76087 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 TCL1BO95988 128 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE12FP0CL80 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE12GP0CL81 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE12IP0CL82 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 HERV-K104P63124 156 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE4Q13068 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 GAGE5Q13069 117 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 WFDC2Q14508 124 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 COPS9Q8WXC6 57 aa5.34□□□□□ -1.55
CCNL1-218ENST00000476744 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
CCNL1-218ENST00000476744 NIPBLQ6KC79 2804 aaeCLIP5.33□□□□□ -1.56
CCNL1-218ENST00000476744 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 IGKV2D-30A0A075B6S6 120 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 A0A1B0GUV1 79 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 J3QR89 54 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 LINC01561Q8N1V8 128 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 WFDC9Q8NEX5 89 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 ERG28Q9UKR5 140 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 NOTCH2Q04721 2471 aa5.33□□□□□ -1.56
CCNL1-218ENST00000476744 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 TRGV4A0A0C4DH28 118 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 LOC100131303A0A0U1RQF7 123 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 A8MZ25 164 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 CRLF1O75462 422 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 ETDBQ3ZM63 59 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 SFTA2Q6UW10 78 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 TEN1Q86WV5 123 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 VPS25Q9BRG1 176 aa5.32□□□□□ -1.56
CCNL1-218ENST00000476744 TRAV26-1A0A087WT03 109 aa5.31□□□□□ -1.56
CCNL1-218ENST00000476744 LOC107984156A0A0G2JMH3 177 aa5.31□□□□□ -1.56
CCNL1-218ENST00000476744 INAFM1C9JVW0 142 aa5.31□□□□□ -1.56
CCNL1-218ENST00000476744 UBE2L6O14933 153 aa5.31□□□□□ -1.56
CCNL1-218ENST00000476744 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms