RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 MRPL54Q6P161 138 aaKnown RBP-0.33□□□□□ -2.46
LTN1-204ENST00000475344 NALCNQ8IZF0 1738 aa-0.33□□□□□ -2.46
LTN1-204ENST00000475344 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
LTN1-204ENST00000475344 A2ML1A8K2U0 1454 aa-0.34□□□□□ -2.46
LTN1-204ENST00000475344 CHKB-CPT1BH3BT56 60 aa-0.34□□□□□ -2.46
LTN1-204ENST00000475344 SFT2D2O95562 160 aa-0.34□□□□□ -2.46
LTN1-204ENST00000475344 ARHGEF5Q12774 1597 aa-0.34□□□□□ -2.46
LTN1-204ENST00000475344 USH2AO75445 5202 aa-0.34□□□□□ -2.46
LTN1-204ENST00000475344 EP300Q09472 2414 aaPredicted RBP-0.34□□□□□ -2.46
LTN1-204ENST00000475344 KDM5AP29375 1690 aaKnown RBP-0.34□□□□□ -2.46
LTN1-204ENST00000475344 RAPGEF6Q8TEU7 1601 aa-0.35□□□□□ -2.46
LTN1-204ENST00000475344 LOC285095A0A1B0GVY8 99 aa-0.35□□□□□ -2.47
LTN1-204ENST00000475344 TNFP01375 233 aa-0.35□□□□□ -2.47
LTN1-204ENST00000475344 PIGYQ3MUY2 71 aa-0.35□□□□□ -2.47
LTN1-204ENST00000475344 C9orf153Q5TBE3 101 aa-0.35□□□□□ -2.47
LTN1-204ENST00000475344 MYOZ3Q8TDC0 251 aa-0.35□□□□□ -2.47
LTN1-204ENST00000475344 KTN1Q86UP2 1357 aaKnown RBP-0.35□□□□□ -2.47
LTN1-204ENST00000475344 SRRM2Q9UQ35 2752 aaKnown RBP-0.35□□□□□ -2.47
LTN1-204ENST00000475344 TET3O43151 1660 aa-0.36□□□□□ -2.47
LTN1-204ENST00000475344 NSD3Q9BZ95 1437 aa-0.36□□□□□ -2.47
LTN1-204ENST00000475344 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
LTN1-204ENST00000475344 RPL13AP3Q6NVV1 102 aa-0.36□□□□□ -2.47
LTN1-204ENST00000475344 DPH3P1Q9H4G8 78 aa-0.36□□□□□ -2.47
LTN1-204ENST00000475344 LRP1BQ9NZR2 4599 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 A0A1B0GV90 55 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 SNAPC5O75971 98 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 IGLC1P0CG04 106 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 SPRR1BP22528 89 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 CDC42SE2Q9NRR3 84 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 SHANK2Q9UPX8 1470 aa-0.37□□□□□ -2.47
LTN1-204ENST00000475344 NBEAL1Q6ZS30 2694 aa-0.38□□□□□ -2.47
LTN1-204ENST00000475344 UBR4Q5T4S7 5183 aa-0.38□□□□□ -2.47
LTN1-204ENST00000475344 UBE2L5PA0A1B0GUS4 154 aa-0.38□□□□□ -2.47
LTN1-204ENST00000475344 UBE2L3P68036 154 aaKnown RBP-0.38□□□□□ -2.47
LTN1-204ENST00000475344 SPRR4Q96PI1 79 aa-0.38□□□□□ -2.47
LTN1-204ENST00000475344 NXT2Q9NPJ8 142 aaKnown RBP-0.38□□□□□ -2.47
LTN1-204ENST00000475344 CNOT1A5YKK6 2376 aaKnown RBP-0.38□□□□□ -2.47
LTN1-204ENST00000475344 ARHGEF12Q9NZN5 1544 aa-0.38□□□□□ -2.47
LTN1-204ENST00000475344 K7EQZ3 153 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 DLEU1O43261 78 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 MGPP08493 103 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 C10orf113Q5VZT2 155 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 FAM223AQ8IWN6 122 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 TMEM263Q8WUH6 116 aaKnown RBP-0.39□□□□□ -2.47
LTN1-204ENST00000475344 ARL2-SNX15V9GYD0 113 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 HMGXB3Q12766 1538 aa-0.39□□□□□ -2.47
LTN1-204ENST00000475344 SMG6Q86US8 1419 aaKnown RBP-0.39□□□□□ -2.47
LTN1-204ENST00000475344 STAB2Q8WWQ8 2551 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 WDR7Q9Y4E6 1490 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 COX6B1P14854 86 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 GNG11P61952 73 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 DEFB123Q8N688 67 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 UQCR10Q9UDW1 63 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 RYR1P21817 5038 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 SCN7AQ01118 1682 aa-0.4□□□□□ -2.47
LTN1-204ENST00000475344 PDZD2O15018 2839 aa-0.41□□□□□ -2.47
LTN1-204ENST00000475344 POLA1P09884 1462 aaPredicted RBP-0.41□□□□□ -2.47
LTN1-204ENST00000475344 MYOM2P54296 1465 aa-0.41□□□□□ -2.47
LTN1-204ENST00000475344 EFCAB10A6NFE3 127 aa-0.41□□□□□ -2.48
LTN1-204ENST00000475344 FAM24AA6NFZ4 105 aa-0.41□□□□□ -2.48
LTN1-204ENST00000475344 SFTA2Q6UW10 78 aa-0.41□□□□□ -2.48
LTN1-204ENST00000475344 FAIMQ9NVQ4 179 aa-0.41□□□□□ -2.48
LTN1-204ENST00000475344 HERC1Q15751 4861 aa-0.41□□□□□ -2.48
LTN1-204ENST00000475344 HYDINQ4G0P3 5121 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 FAT1Q14517 4588 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 UBA52P62987 128 aaKnown RBP-0.42□□□□□ -2.48
LTN1-204ENST00000475344 KRTAP20-2Q3LI61 65 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 FAM167A-AS1Q96KT0 104 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 MANBALQ9NQG1 85 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 IER3IP1Q9Y5U9 82 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 SCAPERQ9BY12 1400 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
LTN1-204ENST00000475344 HERC2O95714 4834 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 TGP01266 2768 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 PDCD11Q14690 1871 aaKnown RBP-0.43□□□□□ -2.48
LTN1-204ENST00000475344 LINC00959A0A1B0GUT2 108 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 MT4P47944 62 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 ATP5EP56381 51 aaPredicted RBP-0.43□□□□□ -2.48
LTN1-204ENST00000475344 Q0VG73 95 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 REV3LO60673 3130 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
LTN1-204ENST00000475344 RNF213Q63HN8 5207 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 CORTO00230 105 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 PPP3R1P63098 170 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 WHAMMP3Q1A5X7 153 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 LCN9Q8WX39 176 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 LINC01600Q96MT4 127 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 GAPVD1Q14C86 1478 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 EPPK1P58107 5090 aaKnown RBP-0.44□□□□□ -2.48
LTN1-204ENST00000475344 EHBP1L1Q8N3D4 1523 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 ANKRD36A6QL64 1941 aa-0.44□□□□□ -2.48
LTN1-204ENST00000475344 MAGI1Q96QZ7 1491 aaPredicted RBP-0.45□□□□□ -2.48
LTN1-204ENST00000475344 TRBV7-4A0A0J9YYF1 115 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 F6UZH7 168 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 GNG4P50150 75 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 UBE2D3P61077 147 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 UBE2D2P62837 147 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 SVBPQ8N300 66 aa-0.45□□□□□ -2.48
LTN1-204ENST00000475344 FDCSPQ8NFU4 85 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms