RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
SAMM50-203ENST00000474323 SONP18583 2426 aaKnown RBP10.51□□□□□ -0.73
SAMM50-203ENST00000474323 PDZD2O15018 2839 aa10.51□□□□□ -0.73
SAMM50-203ENST00000474323 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
SAMM50-203ENST00000474323 SPINK13Q1W4C9 94 aa10.51□□□□□ -0.73
SAMM50-203ENST00000474323 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
SAMM50-203ENST00000474323 FAM218AQ96MZ4 157 aa10.51□□□□□ -0.73
SAMM50-203ENST00000474323 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
SAMM50-203ENST00000474323 IGHV3-73A0A0B4J1V6 119 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
SAMM50-203ENST00000474323 KRTAP1-3Q8IUG1 177 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 PROK1P58294 105 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 HIST2H2BDQ6DRA6 164 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
SAMM50-203ENST00000474323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-203ENST00000474323 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
SAMM50-203ENST00000474323 NACAE9PAV3 2078 aa10.49□□□□□ -0.73
SAMM50-203ENST00000474323 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 ACANP16112 2415 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 A6NDX4 124 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 DNAL4O96015 105 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 Q6JHZ5 121 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-203ENST00000474323 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
SAMM50-203ENST00000474323 TRAV13-1A0A0B4J241 112 aa10.47□□□□□ -0.73
SAMM50-203ENST00000474323 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
SAMM50-203ENST00000474323 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
SAMM50-203ENST00000474323 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
SAMM50-203ENST00000474323 COX6A2Q02221 97 aa10.47□□□□□ -0.73
SAMM50-203ENST00000474323 BLCAPP62952 87 aa10.46□□□□□ -0.73
SAMM50-203ENST00000474323 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
SAMM50-203ENST00000474323 MYO9AB2RTY4 2548 aa10.46□□□□□ -0.73
SAMM50-203ENST00000474323 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.74
SAMM50-203ENST00000474323 K7EQG2 157 aa10.46□□□□□ -0.74
SAMM50-203ENST00000474323 IGHV4-59P01825 116 aa10.46□□□□□ -0.74
SAMM50-203ENST00000474323 Q9HAA7 133 aa10.46□□□□□ -0.74
SAMM50-203ENST00000474323 NOTCH2Q04721 2471 aa10.46□□□□□ -0.74
SAMM50-203ENST00000474323 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
SAMM50-203ENST00000474323 Q9UF83 564 aa10.45□□□□□ -0.74
SAMM50-203ENST00000474323 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
SAMM50-203ENST00000474323 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SAMM50-203ENST00000474323 IGHV3OR16-12A0A075B7B8 117 aa10.44□□□□□ -0.74
SAMM50-203ENST00000474323 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
SAMM50-203ENST00000474323 IGKV3D-7A0A0C4DH55 119 aa10.43□□□□□ -0.74
SAMM50-203ENST00000474323 Q6ZSN1 163 aa10.43□□□□□ -0.74
SAMM50-203ENST00000474323 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
SAMM50-203ENST00000474323 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
SAMM50-203ENST00000474323 FSHBP01225 129 aa10.42□□□□□ -0.74
SAMM50-203ENST00000474323 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
SAMM50-203ENST00000474323 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 LINC01561Q8N1V8 128 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 CRPP02741 224 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
SAMM50-203ENST00000474323 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 HTN1P15515 57 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
SAMM50-203ENST00000474323 C14orf132Q9NPU4 83 aa10.41□□□□□ -0.74
SAMM50-203ENST00000474323 HOXD3P31249 432 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-203ENST00000474323 DSCR8Q96T75 97 aa10.4□□□□□ -0.74
SAMM50-203ENST00000474323 OXTP01178 125 aa10.4□□□□□ -0.74
SAMM50-203ENST00000474323 MTORP42345 2549 aa10.4□□□□□ -0.74
SAMM50-203ENST00000474323 AKAP9Q99996 3911 aa10.4□□□□□ -0.75
SAMM50-203ENST00000474323 H0YGX0 51 aa10.39□□□□□ -0.75
SAMM50-203ENST00000474323 SYNJ2BPP57105 145 aa10.39□□□□□ -0.75
SAMM50-203ENST00000474323 CFHR3Q02985 330 aa10.39□□□□□ -0.75
SAMM50-203ENST00000474323 A0A087WVE0 104 aa10.38□□□□□ -0.75
SAMM50-203ENST00000474323 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
SAMM50-203ENST00000474323 NF1P21359 2839 aa10.38□□□□□ -0.75
SAMM50-203ENST00000474323 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
SAMM50-203ENST00000474323 Q5XG85 94 aa10.38□□□□□ -0.75
SAMM50-203ENST00000474323 Q6YL49 198 aa10.38□□□□□ -0.75
SAMM50-203ENST00000474323 A0A087WYN8 130 aa10.37□□□□□ -0.75
SAMM50-203ENST00000474323 LINC00337Q8N6G1 96 aa10.37□□□□□ -0.75
SAMM50-203ENST00000474323 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
SAMM50-203ENST00000474323 SMIM11BQ8TCY0 68 aa10.36□□□□□ -0.75
SAMM50-203ENST00000474323 IGKV2-28A0A075B6P5 120 aa10.35□□□□□ -0.75
SAMM50-203ENST00000474323 IGKV2D-28P01615 120 aa10.35□□□□□ -0.75
SAMM50-203ENST00000474323 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
SAMM50-203ENST00000474323 NDUFC2O95298 119 aa10.34□□□□□ -0.75
SAMM50-203ENST00000474323 SND1-IT1Q9HBX3 110 aa10.34□□□□□ -0.75
SAMM50-203ENST00000474323 RETNQ9HD89 108 aa10.34□□□□□ -0.75
SAMM50-203ENST00000474323 PSMB8P28062 276 aa10.34□□□□□ -0.75
SAMM50-203ENST00000474323 C10orf99Q6UWK7 81 aa10.34□□□□□ -0.75
SAMM50-203ENST00000474323 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.75
SAMM50-203ENST00000474323 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
SAMM50-203ENST00000474323 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
SAMM50-203ENST00000474323 A8MTW9 85 aa10.33□□□□□ -0.76
SAMM50-203ENST00000474323 CUBNO60494 3623 aa10.33□□□□□ -0.76
SAMM50-203ENST00000474323 PRM2P04554 102 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 FHL2Q14192 279 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 MIR7-3HGQ8N6C7 128 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 SORL1Q92673 2214 aa10.32□□□□□ -0.76
SAMM50-203ENST00000474323 NCR3O14931 201 aa10.31□□□□□ -0.76
SAMM50-203ENST00000474323 CCKP06307 115 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms