RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SHANK2-AS3Q9BTD1 123 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 TRBV7-3A0A075B6L6 115 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 A0A087WX48 190 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 TRAV8-4A0A0B4J246 113 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 D6R8Y8 96 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 NCR2O95944 276 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 UBE2D3P61077 147 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 UBE2D2P62837 147 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 Q8N8P6 123 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
CKS1B-205ENST00000473344 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 PPP1R17O96001 155 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-205ENST00000473344 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
CKS1B-205ENST00000473344 PDE6HQ13956 83 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 Q5VSD8 79 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 NFE4Q86UQ8 179 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 AMN1Q8IY45 258 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 SLC50A1Q9BRV3 221 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 AAMDCQ9H7C9 122 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 HHLA3Q9XRX5 114 aa4.76□□□□□ -1.65
CKS1B-205ENST00000473344 A0A096LNJ9 63 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 A0A096LPF7 62 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-205ENST00000473344 TRAV12-3A0A0B4J271 114 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 F8VRH5 84 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 K7ERJ3 54 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 COX6CP09669 75 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 ARMS2P0C7Q2 107 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 PYYP10082 97 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 FUSP35637 526 aaKnown RBP eCLIP4.75□□□□□ -1.65
CKS1B-205ENST00000473344 LEPP41159 167 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 UBE2D1P51668 147 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 ZNF138P52744 262 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 MRPL51Q4U2R6 128 aaKnown RBP4.75□□□□□ -1.65
CKS1B-205ENST00000473344 COX8CQ7Z4L0 72 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 PRNTQ86SH4 94 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 LINC00612Q8N6U2 182 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 ZC2HC1AQ96GY0 325 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
CKS1B-205ENST00000473344 H3BT86 120 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 UQCRQO14949 82 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 SLC25A20O43772 301 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 NXPH4O95158 308 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 GNG5P63218 68 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 DAZ2Q13117 558 aaKnown RBP4.74□□□□□ -1.65
CKS1B-205ENST00000473344 LAGE3Q14657 143 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 TMEM170BQ5T4T1 132 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 SCGB1D4Q6XE38 83 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 Q6ZRN7 208 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-205ENST00000473344 Q6ZTI0 123 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 ICOSQ9Y6W8 199 aa4.74□□□□□ -1.65
CKS1B-205ENST00000473344 TRGV1A0A0A0MS02 117 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 TRBV7-7A0A0K0K1E9 115 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 H3BTX0 84 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 H3BVH4 76 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-205ENST00000473344 PATE2Q6UY27 113 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 C10orf126Q8N4M7 172 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 ANKRD29Q8N6D5 301 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 VSIG2Q96IQ7 327 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 PRO1854Q9UHT4 67 aa4.73□□□□□ -1.65
CKS1B-205ENST00000473344 CSDC2Q9Y534 153 aaKnown RBP4.73□□□□□ -1.65
CKS1B-205ENST00000473344 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
CKS1B-205ENST00000473344 A0A087WTM6 91 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 TRBV10-2A0A0K0K1G8 114 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 PRAC2D3DTV9 90 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 M0R2P5 195 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 MRPS12O15235 138 aaKnown RBP4.72□□□□□ -1.65
CKS1B-205ENST00000473344 ORM1P02763 201 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 DNAH10OSP0CZ25 163 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 LYZL1Q6UWQ5 148 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 FAM159AQ6UWV7 190 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 GOLT1AQ6ZVE7 132 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 C3orf22Q8N5N4 141 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 UBE2WQ96B02 151 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 C18orf15Q96N68 181 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 ODF3Q96PU9 254 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 CNFNQ9BYD5 112 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 PRO0255Q9UI72 69 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
CKS1B-205ENST00000473344 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-205ENST00000473344 IGKV2D-26A0A0A0MRZ7 120 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 A0A0B4J2C4 111 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 ZNF815PA8K554 130 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 PSCAO43653 123 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 TNFRSF6BO95407 300 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 CXCL5P42830 114 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 KRTAP10-1P60331 282 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms