RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 M0R143 59 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 EREGO14944 169 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 LGALS3P17931 250 aaKnown RBP6.42□□□□□ -1.38
VPS52-216ENST00000471309 COX6A2Q02221 97 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 IGKV3OR2-268A0A0C4DH90 116 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 IGLV5-39A0A0G2JS06 123 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 ANGP03950 147 aaKnown RBP6.41□□□□□ -1.38
VPS52-216ENST00000471309 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 REG3AQ06141 175 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 SS18Q15532 418 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 ESRGQ1W209 222 aa6.41□□□□□ -1.38
VPS52-216ENST00000471309 TRAV8-3A0A0A6YYJ7 113 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 IGHV3OR16-9A0A0B4J2B5 98 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 HSD52Q0P140 79 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
VPS52-216ENST00000471309 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 LINC00269Q8N2A0 174 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 Q8N3U1 123 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 PRR34Q9NV39 138 aa6.4□□□□□ -1.38
VPS52-216ENST00000471309 ZFAND6Q6FIF0 208 aa6.39□□□□□ -1.39
VPS52-216ENST00000471309 CLPSL2Q6UWE3 100 aa6.39□□□□□ -1.39
VPS52-216ENST00000471309 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
VPS52-216ENST00000471309 A0A087WZ39 114 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
VPS52-216ENST00000471309 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
VPS52-216ENST00000471309 TAL2Q16559 108 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 LINC01556Q5JQF7 62 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
VPS52-216ENST00000471309 IGLL5B9A064 214 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 NDUFA1O15239 70 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 XCL1P47992 114 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 BATFQ16520 125 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 C10orf126Q8N4M7 172 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
VPS52-216ENST00000471309 SPANXB1Q9NS25 103 aaPredicted RBP6.37□□□□□ -1.39
VPS52-216ENST00000471309 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 KLK12Q9UKR0 248 aa6.37□□□□□ -1.39
VPS52-216ENST00000471309 CRPP02741 224 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 DNAH10OSP0CZ25 163 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 CCL18P55774 89 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 ENHOQ6UWT2 76 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 LINC00588Q9Y4M8 146 aa6.36□□□□□ -1.39
VPS52-216ENST00000471309 TRAV8-4A0A0B4J246 113 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 A0A0J9YXY3 114 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 NUPR2A6NF83 97 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 FOXI1Q12951 378 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 MIAQ16674 131 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 COL5A1-AS1Q5SY13 56 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 COX7B2Q8TF08 81 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 ORAOV1Q8WV07 137 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
VPS52-216ENST00000471309 IGLV10-54A0A075B6I4 117 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 COX7A2LO14548 114 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 HERV-K104P63124 156 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 SFTA2Q6UW10 78 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 C5orf38Q86SI9 138 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 CEND1Q8N111 149 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 UBE2WQ96B02 151 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
VPS52-216ENST00000471309 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 Q9H8V8 135 aa6.34□□□□□ -1.39
VPS52-216ENST00000471309 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 TIMM17BO60830 172 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 GCSHP23434 173 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 Q8IZM0 81 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 LITAFQ99732 161 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
VPS52-216ENST00000471309 A6NDN8 102 aa6.32□□□□□ -1.4
VPS52-216ENST00000471309 FXYD2P54710 66 aa6.32□□□□□ -1.4
VPS52-216ENST00000471309 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS52-216ENST00000471309 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
VPS52-216ENST00000471309 APOMO95445 188 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 MALP21145 153 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 Q6ZVH6 145 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
VPS52-216ENST00000471309 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 IBA57-AS1B1ANH7 110 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 K7EP13 123 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 PRSS2P07478 247 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 CXCL5P42830 114 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
VPS52-216ENST00000471309 C1orf43Q9BWL3 253 aa6.3□□□□□ -1.4
VPS52-216ENST00000471309 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
VPS52-216ENST00000471309 TNP2Q05952 138 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms