RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PRIMA1Q86XR5 153 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 LYRM7Q5U5X0 104 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 SLC25A20O43772 301 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
MCF2L-221ENST00000469415 CRLF1O75462 422 aa12.66□□□□□ -0.38
MCF2L-221ENST00000469415 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
MCF2L-221ENST00000469415 ANAPC13Q9BS18 74 aa12.66□□□□□ -0.38
MCF2L-221ENST00000469415 TRAV4A0A0B4J268 109 aa12.66□□□□□ -0.38
MCF2L-221ENST00000469415 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
MCF2L-221ENST00000469415 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
MCF2L-221ENST00000469415 C19orf73Q9NVV2 129 aa12.65□□□□□ -0.38
MCF2L-221ENST00000469415 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-221ENST00000469415 SPATA25Q9BR10 227 aa12.65□□□□□ -0.38
MCF2L-221ENST00000469415 RPL13AP40429 203 aaKnown RBP12.64□□□□□ -0.39
MCF2L-221ENST00000469415 ZFAND6Q6FIF0 208 aa12.64□□□□□ -0.39
MCF2L-221ENST00000469415 TMEM243Q9BU79 118 aa12.64□□□□□ -0.39
MCF2L-221ENST00000469415 MIAQ16674 131 aa12.64□□□□□ -0.39
MCF2L-221ENST00000469415 IGLV4-60A0A075B6I1 120 aa12.64□□□□□ -0.39
MCF2L-221ENST00000469415 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
MCF2L-221ENST00000469415 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 PIK3CD-AS1Q5SR53 167 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 INAFM1C9JVW0 142 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 HILS1P60008 231 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 C5orf38Q86SI9 138 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-221ENST00000469415 CDIP1Q9H305 208 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 CDC42SE2Q9NRR3 84 aa12.63□□□□□ -0.39
MCF2L-221ENST00000469415 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 SMIM1B2RUZ4 78 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 HERVK_113P63121 156 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
MCF2L-221ENST00000469415 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
MCF2L-221ENST00000469415 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
MCF2L-221ENST00000469415 LY6G6DO95868 133 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 TEN1Q86WV5 123 aa12.62□□□□□ -0.39
MCF2L-221ENST00000469415 ICOSQ9Y6W8 199 aa12.61□□□□□ -0.39
MCF2L-221ENST00000469415 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
MCF2L-221ENST00000469415 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 F8P00451 2351 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 LINC01620Q4KN68 170 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 TIRAPP58753 221 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
MCF2L-221ENST00000469415 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
MCF2L-221ENST00000469415 CCDC179H3BU77 68 aa12.58□□□□□ -0.4
MCF2L-221ENST00000469415 DEFB135Q30KP9 77 aa12.58□□□□□ -0.4
MCF2L-221ENST00000469415 PFN2P35080 140 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 FHL2Q14192 279 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 C16orf95Q9H693 158 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 KMT2BQ9UMN6 2715 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-221ENST00000469415 NDUFA1O15239 70 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 GYPEP15421 78 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 HTN3P15516 51 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 ATXN8Q156A1 80 aa12.57□□□□□ -0.4
MCF2L-221ENST00000469415 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
MCF2L-221ENST00000469415 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
MCF2L-221ENST00000469415 XCL1P47992 114 aa12.55□□□□□ -0.4
MCF2L-221ENST00000469415 C2orf82Q6UX34 121 aa12.55□□□□□ -0.4
MCF2L-221ENST00000469415 COX6CP09669 75 aa12.54□□□□□ -0.4
MCF2L-221ENST00000469415 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
MCF2L-221ENST00000469415 Q8N3U1 123 aa12.54□□□□□ -0.4
MCF2L-221ENST00000469415 STAB1Q9NY15 2570 aa12.54□□□□□ -0.4
MCF2L-221ENST00000469415 LINC00158P58513 81 aa12.54□□□□□ -0.4
MCF2L-221ENST00000469415 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
MCF2L-221ENST00000469415 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
MCF2L-221ENST00000469415 IGLV5-45A0A087WSX0 123 aa12.53□□□□□ -0.4
MCF2L-221ENST00000469415 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.4
MCF2L-221ENST00000469415 F5H768 121 aa12.52□□□□□ -0.4
MCF2L-221ENST00000469415 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
MCF2L-221ENST00000469415 FAM222AQ5U5X8 452 aa12.51□□□□□ -0.41
MCF2L-221ENST00000469415 MIR7-3HGQ8N6C7 128 aa12.51□□□□□ -0.41
MCF2L-221ENST00000469415 TRBV30A0A0K0K1B3 111 aa12.51□□□□□ -0.41
MCF2L-221ENST00000469415 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
MCF2L-221ENST00000469415 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-221ENST00000469415 H7C423 109 aa12.5□□□□□ -0.41
MCF2L-221ENST00000469415 MAST4O15021 2626 aa12.5□□□□□ -0.41
MCF2L-221ENST00000469415 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
MCF2L-221ENST00000469415 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-221ENST00000469415 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
MCF2L-221ENST00000469415 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
MCF2L-221ENST00000469415 CSDC2Q9Y534 153 aaKnown RBP12.47□□□□□ -0.41
MCF2L-221ENST00000469415 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
MCF2L-221ENST00000469415 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.41
MCF2L-221ENST00000469415 IFITM1P13164 125 aa12.46□□□□□ -0.41
MCF2L-221ENST00000469415 X6R8D5 127 aa12.46□□□□□ -0.41
MCF2L-221ENST00000469415 C6orf226Q5I0X4 101 aa12.45□□□□□ -0.42
MCF2L-221ENST00000469415 CITED1Q99966 193 aa12.45□□□□□ -0.42
MCF2L-221ENST00000469415 Q9HAA7 133 aa12.45□□□□□ -0.42
MCF2L-221ENST00000469415 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
MCF2L-221ENST00000469415 PAX4O43316 350 aa12.44□□□□□ -0.42
MCF2L-221ENST00000469415 UBE2WQ96B02 151 aa12.44□□□□□ -0.42
MCF2L-221ENST00000469415 PPDPFQ9H3Y8 114 aa12.43□□□□□ -0.42
MCF2L-221ENST00000469415 LINC00526Q96FQ7 95 aa12.43□□□□□ -0.42
MCF2L-221ENST00000469415 TIMM17BO60830 172 aa12.43□□□□□ -0.42
MCF2L-221ENST00000469415 SND1-IT1Q9HBX3 110 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms