RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SETXQ7Z333 2677 aaKnown RBP13.01□□□□□ -0.33
SYNE4-204ENST00000465425 TRBV6-4A0A1B0GX49 114 aa13.01□□□□□ -0.33
SYNE4-204ENST00000465425 MT-ATP8P03928 68 aa13.01□□□□□ -0.33
SYNE4-204ENST00000465425 C19orf73Q9NVV2 129 aa13□□□□□ -0.33
SYNE4-204ENST00000465425 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
SYNE4-204ENST00000465425 C2orf82Q6UX34 121 aa13□□□□□ -0.33
SYNE4-204ENST00000465425 CLEC2BQ92478 149 aa13□□□□□ -0.33
SYNE4-204ENST00000465425 A0A1B0GV72 72 aa12.99□□□□□ -0.33
SYNE4-204ENST00000465425 F5H768 121 aa12.99□□□□□ -0.33
SYNE4-204ENST00000465425 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
SYNE4-204ENST00000465425 C2CD3Q4AC94 2353 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 HERV-K104P63124 156 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 LINC01600Q96MT4 127 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 TENM4Q6N022 2769 aa12.98□□□□□ -0.33
SYNE4-204ENST00000465425 H7C423 109 aa12.97□□□□□ -0.33
SYNE4-204ENST00000465425 LST1O00453 97 aa12.97□□□□□ -0.33
SYNE4-204ENST00000465425 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
SYNE4-204ENST00000465425 ACANP16112 2415 aa12.97□□□□□ -0.33
SYNE4-204ENST00000465425 MTORP42345 2549 aa12.97□□□□□ -0.33
SYNE4-204ENST00000465425 H3BT86 120 aa12.96□□□□□ -0.33
SYNE4-204ENST00000465425 PLA2G2AP14555 144 aa12.95□□□□□ -0.34
SYNE4-204ENST00000465425 HILS1P60008 231 aa12.95□□□□□ -0.34
SYNE4-204ENST00000465425 GAGE6Q13070 117 aa12.95□□□□□ -0.34
SYNE4-204ENST00000465425 IGKV3OR2-268A0A0C4DH90 116 aa12.94□□□□□ -0.34
SYNE4-204ENST00000465425 CKS1BP61024 79 aa12.94□□□□□ -0.34
SYNE4-204ENST00000465425 SOSTDC1Q6X4U4 206 aa12.94□□□□□ -0.34
SYNE4-204ENST00000465425 PDZD2O15018 2839 aa12.93□□□□□ -0.34
SYNE4-204ENST00000465425 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
SYNE4-204ENST00000465425 FHL2Q14192 279 aa12.93□□□□□ -0.34
SYNE4-204ENST00000465425 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
SYNE4-204ENST00000465425 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
SYNE4-204ENST00000465425 TOMM7Q9P0U1 55 aa12.91□□□□□ -0.34
SYNE4-204ENST00000465425 PF4P02776 101 aa12.9□□□□□ -0.34
SYNE4-204ENST00000465425 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
SYNE4-204ENST00000465425 DEFB130BP0DP73 79 aa12.9□□□□□ -0.34
SYNE4-204ENST00000465425 DEFB130AP0DP74 79 aa12.9□□□□□ -0.34
SYNE4-204ENST00000465425 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
SYNE4-204ENST00000465425 COX7A2LO14548 114 aa12.89□□□□□ -0.35
SYNE4-204ENST00000465425 SNCGO76070 127 aa12.88□□□□□ -0.35
SYNE4-204ENST00000465425 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
SYNE4-204ENST00000465425 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
SYNE4-204ENST00000465425 PPDPFQ9H3Y8 114 aa12.87□□□□□ -0.35
SYNE4-204ENST00000465425 CRLF1O75462 422 aa12.85□□□□□ -0.35
SYNE4-204ENST00000465425 MIR7-3HGQ8N6C7 128 aa12.85□□□□□ -0.35
SYNE4-204ENST00000465425 SVIPQ8NHG7 77 aa12.85□□□□□ -0.35
SYNE4-204ENST00000465425 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
SYNE4-204ENST00000465425 IGHV3OR16-9A0A0B4J2B5 98 aa12.84□□□□□ -0.35
SYNE4-204ENST00000465425 J3QKU1 62 aa12.84□□□□□ -0.35
SYNE4-204ENST00000465425 ANK3Q12955 4377 aaKnown RBP12.84□□□□□ -0.35
SYNE4-204ENST00000465425 TRAV13-2A0A0B4J235 113 aa12.84□□□□□ -0.35
SYNE4-204ENST00000465425 CRPP02741 224 aa12.83□□□□□ -0.36
SYNE4-204ENST00000465425 LINC00158P58513 81 aa12.83□□□□□ -0.36
SYNE4-204ENST00000465425 GYPEP15421 78 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 SMR3AQ99954 134 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 CITED1Q99966 193 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 A0A087WZ39 114 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 C5orf38Q86SI9 138 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 LINC00482Q8N8I6 264 aa12.82□□□□□ -0.36
SYNE4-204ENST00000465425 HIVEP2P31629 2446 aa12.81□□□□□ -0.36
SYNE4-204ENST00000465425 GAGE2BQ13066 116 aa12.81□□□□□ -0.36
SYNE4-204ENST00000465425 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
SYNE4-204ENST00000465425 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
SYNE4-204ENST00000465425 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
SYNE4-204ENST00000465425 KRTAP10-3P60369 221 aa12.8□□□□□ -0.36
SYNE4-204ENST00000465425 DEFB121Q5J5C9 76 aa12.8□□□□□ -0.36
SYNE4-204ENST00000465425 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
SYNE4-204ENST00000465425 LINC00959A0A1B0GUT2 108 aa12.79□□□□□ -0.36
SYNE4-204ENST00000465425 TRACP01848 142 aa12.79□□□□□ -0.36
SYNE4-204ENST00000465425 LINC00612Q8N6U2 182 aa12.79□□□□□ -0.36
SYNE4-204ENST00000465425 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
SYNE4-204ENST00000465425 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
SYNE4-204ENST00000465425 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
SYNE4-204ENST00000465425 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
SYNE4-204ENST00000465425 PRO0255Q9UI72 69 aa12.78□□□□□ -0.36
SYNE4-204ENST00000465425 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.36
SYNE4-204ENST00000465425 LINC00337Q8N6G1 96 aa12.77□□□□□ -0.36
SYNE4-204ENST00000465425 ANAPC13Q9BS18 74 aa12.77□□□□□ -0.36
SYNE4-204ENST00000465425 X6R8D5 127 aa12.77□□□□□ -0.36
SYNE4-204ENST00000465425 PFN2P35080 140 aa12.77□□□□□ -0.37
SYNE4-204ENST00000465425 RPL28P46779 137 aaKnown RBP12.77□□□□□ -0.37
SYNE4-204ENST00000465425 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
SYNE4-204ENST00000465425 XCL1P47992 114 aa12.76□□□□□ -0.37
SYNE4-204ENST00000465425 SS18Q15532 418 aa12.76□□□□□ -0.37
SYNE4-204ENST00000465425 IGKV2-28A0A075B6P5 120 aa12.76□□□□□ -0.37
SYNE4-204ENST00000465425 IGKV2D-28P01615 120 aa12.76□□□□□ -0.37
SYNE4-204ENST00000465425 FN1P02751 2386 aaKnown RBP12.75□□□□□ -0.37
SYNE4-204ENST00000465425 A0A096LPF7 62 aa12.75□□□□□ -0.37
SYNE4-204ENST00000465425 A0A1B0GUV1 79 aa12.75□□□□□ -0.37
SYNE4-204ENST00000465425 FAM218AQ96MZ4 157 aa12.75□□□□□ -0.37
SYNE4-204ENST00000465425 HELZ2Q9BYK8 2649 aaKnown RBP12.75□□□□□ -0.37
SYNE4-204ENST00000465425 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
SYNE4-204ENST00000465425 CCL18P55774 89 aa12.74□□□□□ -0.37
SYNE4-204ENST00000465425 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
SYNE4-204ENST00000465425 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
SYNE4-204ENST00000465425 TTC32Q5I0X7 151 aa12.73□□□□□ -0.37
SYNE4-204ENST00000465425 GCN1Q92616 2671 aaKnown RBP12.73□□□□□ -0.37
SYNE4-204ENST00000465425 Q6Q795 121 aa12.73□□□□□ -0.37
SYNE4-204ENST00000465425 CLPSL2Q6UWE3 100 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms