RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
EXOSC3-203ENST00000465229 UBE2D1P51668 147 aa11.62□□□□□ -0.55
EXOSC3-203ENST00000465229 TIRAPP58753 221 aa11.62□□□□□ -0.55
EXOSC3-203ENST00000465229 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
EXOSC3-203ENST00000465229 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
EXOSC3-203ENST00000465229 GCSHP23434 173 aa11.61□□□□□ -0.55
EXOSC3-203ENST00000465229 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 FXYD2P54710 66 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 LYSTQ99698 3801 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 CCL18P55774 89 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 SCGB1D4Q6XE38 83 aa11.6□□□□□ -0.55
EXOSC3-203ENST00000465229 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-203ENST00000465229 LELP1Q5T871 98 aa11.59□□□□□ -0.55
EXOSC3-203ENST00000465229 Q6ZVH6 145 aa11.59□□□□□ -0.55
EXOSC3-203ENST00000465229 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 UBE2L6O14933 153 aa11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 OR5A1Q8NGJ0 315 aa11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 SPANXB1Q9NS25 103 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-203ENST00000465229 IGHV1-58A0A0C4DH39 117 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 C9orf118A6NHY6 69 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 PTTG1IPP53801 180 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 GEMIN7Q9H840 131 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 HERVK_113P63121 156 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
EXOSC3-203ENST00000465229 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
EXOSC3-203ENST00000465229 A0A1B0GWB2 263 aa11.55□□□□□ -0.56
EXOSC3-203ENST00000465229 UBE2V1Q13404 147 aa11.55□□□□□ -0.56
EXOSC3-203ENST00000465229 DNAH1Q9P2D7 4330 aa11.54□□□□□ -0.56
EXOSC3-203ENST00000465229 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 A6NJY4 79 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 K7EP13 123 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 VAMP3Q15836 100 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 WFDC10BQ8IUB3 73 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 UBE2DNLQ8IWF7 75 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 CHCHD5Q9BSY4 110 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 UPK3BQ9BT76 320 aa11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 NHP2Q9NX24 153 aaKnown RBP11.53□□□□□ -0.56
EXOSC3-203ENST00000465229 CDKN2A-AS1Q9UH64 79 aa11.52□□□□□ -0.57
EXOSC3-203ENST00000465229 GAGE6Q13070 117 aa11.51□□□□□ -0.57
EXOSC3-203ENST00000465229 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
EXOSC3-203ENST00000465229 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
EXOSC3-203ENST00000465229 IGLV5-39A0A0G2JS06 123 aa11.5□□□□□ -0.57
EXOSC3-203ENST00000465229 Q9H8V8 135 aa11.5□□□□□ -0.57
EXOSC3-203ENST00000465229 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 COX6A2Q02221 97 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 Q8N3U1 123 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 H3BUT2 72 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 CCL25O15444 150 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
EXOSC3-203ENST00000465229 ALMS1Q8TCU4 4167 aa11.48□□□□□ -0.57
EXOSC3-203ENST00000465229 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
EXOSC3-203ENST00000465229 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
EXOSC3-203ENST00000465229 A0A1W2PPM0 123 aa11.47□□□□□ -0.57
EXOSC3-203ENST00000465229 LY6G6CO95867 125 aa11.47□□□□□ -0.57
EXOSC3-203ENST00000465229 DNAH10OSP0CZ25 163 aa11.47□□□□□ -0.57
EXOSC3-203ENST00000465229 K7ERJ3 54 aa11.46□□□□□ -0.57
EXOSC3-203ENST00000465229 RBX1P62877 108 aa11.46□□□□□ -0.57
EXOSC3-203ENST00000465229 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.57
EXOSC3-203ENST00000465229 NDUFA1O15239 70 aa11.46□□□□□ -0.58
EXOSC3-203ENST00000465229 TIMM17BO60830 172 aa11.46□□□□□ -0.58
EXOSC3-203ENST00000465229 IGHV3-33P01772 117 aa11.46□□□□□ -0.58
EXOSC3-203ENST00000465229 GTF2H5Q6ZYL4 71 aa11.46□□□□□ -0.58
EXOSC3-203ENST00000465229 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
EXOSC3-203ENST00000465229 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
EXOSC3-203ENST00000465229 KMT2AQ03164 3969 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 FABP2P12104 132 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 LITAFQ99732 161 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 SPANXDQ9BXN6 97 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 SPANXCQ9NY87 97 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
EXOSC3-203ENST00000465229 K7EP34 96 aa11.43□□□□□ -0.58
EXOSC3-203ENST00000465229 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-203ENST00000465229 KLK12Q9UKR0 248 aa11.41□□□□□ -0.58
EXOSC3-203ENST00000465229 ANGP03950 147 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-203ENST00000465229 NAA38Q9BRA0 125 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-203ENST00000465229 KRTAP1-5Q9BYS1 174 aa11.4□□□□□ -0.58
EXOSC3-203ENST00000465229 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
EXOSC3-203ENST00000465229 NBDYA0A0U1RRE5 68 aa11.39□□□□□ -0.59
EXOSC3-203ENST00000465229 SPCS1Q9Y6A9 102 aa11.39□□□□□ -0.59
EXOSC3-203ENST00000465229 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
EXOSC3-203ENST00000465229 LCE6AA0A183 80 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms