RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 NBEAL1Q6ZS30 2694 aa1.38□□□□□ -2.19
VRK2-208ENST00000463222 DNAJC13O75165 2243 aa1.38□□□□□ -2.19
VRK2-208ENST00000463222 MED12Q93074 2177 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 NINQ8N4C6 2090 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 A0A096LNT2 108 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 IFITM5A6NNB3 132 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 ZNF727A8MUV8 499 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 CD3DP04234 171 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 HMGN1P05114 100 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 COX6B1P14854 86 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 RPL37AP61513 92 aaKnown RBP1.37□□□□□ -2.19
VRK2-208ENST00000463222 QRFPP83859 136 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 HIST1H1AQ02539 215 aaPredicted RBP1.37□□□□□ -2.19
VRK2-208ENST00000463222 CSAG1Q6PB30 78 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 TMEM91Q6ZNR0 172 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 SBSPONQ8IVN8 264 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 CTAGE3PQ8IX95 158 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 OR4S1Q8NGB4 309 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 SMIM3Q9BZL3 60 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 FAM107BQ9H098 131 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 SLC35B3Q9H1N7 401 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 COMMD3Q9UBI1 195 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 METTL1Q9UBP6 276 aaKnown RBP1.37□□□□□ -2.19
VRK2-208ENST00000463222 BOKQ9UMX3 212 aaPredicted RBP1.37□□□□□ -2.19
VRK2-208ENST00000463222 DNAJC15Q9Y5T4 150 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 TRRAPQ9Y4A5 3859 aa1.37□□□□□ -2.19
VRK2-208ENST00000463222 MGAM2Q2M2H8 2515 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
VRK2-208ENST00000463222 H3BQF6 201 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 HLA-DRB4P13762 266 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 C10orf111Q8N326 155 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 OR8J3Q8NGG0 315 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 HLA-DRB4X5D2U9 266 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 MYO7BQ6PIF6 2116 aa1.36□□□□□ -2.19
VRK2-208ENST00000463222 PLCE1Q9P212 2302 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 A0A0J9YY99 117 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 PNMA8CA0A1B0GUJ8 204 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 A6NN06 94 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 NDUFA2O43678 99 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 HMGN2P05204 90 aaKnown RBP1.35□□□□□ -2.19
VRK2-208ENST00000463222 IL7P13232 177 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 RPL38P63173 70 aaKnown RBP1.35□□□□□ -2.19
VRK2-208ENST00000463222 PLGLB1Q02325 96 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 SMIM21Q3B7S5 101 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 SCIMPQ6UWF3 145 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 C4orf33Q8N1A6 199 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 OR10AC1Q8NH08 325 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 SDF2Q99470 211 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 VWFP04275 2813 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 PKD1L1Q8TDX9 2849 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 KMT2CQ8NEZ4 4911 aaKnown RBP1.35□□□□□ -2.19
VRK2-208ENST00000463222 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
VRK2-208ENST00000463222 CADP27708 2225 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 USF3Q68DE3 2245 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 FXYD1O00168 92 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 HMGN4O00479 90 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 UQCRHP07919 91 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 LINC00032P0C843 101 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 PRB4P10163 310 aaPredicted RBP1.34□□□□□ -2.19
VRK2-208ENST00000463222 PDE6GP18545 87 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 AKR1D1P51857 326 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 FXYD4P59646 89 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 EMX2Q04743 252 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 PPP3R2Q96LZ3 170 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 SMR3AQ99954 134 aa1.34□□□□□ -2.19
VRK2-208ENST00000463222 RYR3Q15413 4870 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
VRK2-208ENST00000463222 IGKCP01834 107 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 TSPAN19P0C672 248 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 ADCYAP1P18509 176 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 ASB16-AS1Q495Z4 193 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 CLLU1Q5K131 121 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 NCMAPQ5T1S8 102 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 WFDC6Q9BQY6 131 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 COPZ2Q9P299 210 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 CMYA5Q8N3K9 4069 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 ABCA1O95477 2261 aa1.33□□□□□ -2.2
VRK2-208ENST00000463222 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.2
VRK2-208ENST00000463222 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 TPST1O60507 370 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 IDO2Q6ZQW0 420 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 CCL19Q99731 98 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 LINC00470Q9BZP3 86 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 TPT1P8Q9HAU6 139 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 DNAH3Q8TD57 4116 aa1.32□□□□□ -2.2
VRK2-208ENST00000463222 A0A1B0GWA3 101 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 NUPR2A6NF83 97 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 ATP6V1G2-DDX39BF2Z307 99 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 M0R129 80 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 IGF2P01344 180 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 S100A3P33764 101 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 POLR2JP52435 117 aaKnown RBP1.31□□□□□ -2.2
VRK2-208ENST00000463222 FXYD6P3P58550 94 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 IQCJQ1A5X6 159 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 GLYATL3Q5SZD4 288 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 C6orf52Q5T4I8 152 aa1.31□□□□□ -2.2
VRK2-208ENST00000463222 DPY30Q9C005 99 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms