RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GAFA1Q96PS6 74 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 IMUPQ9GZP8 106 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 TMEM133Q9H2Q1 129 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 NXT2Q9NPJ8 142 aaKnown RBP1.63□□□□□ -2.15
HPS3-203ENST00000460822 BOD1L1Q8NFC6 3051 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 A0A087WX48 190 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 IGHV1-18A0A0C4DH31 117 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 MYMXA0A1B0GTQ4 84 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 LINC01549A6NIU2 74 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 FABP5P3A8MUU1 101 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 H3BPC8 53 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 TCL1BO95988 128 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 PLNP26678 52 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 UBE2D1P51668 147 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 LYRM7Q5U5X0 104 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 SBSPONQ8IVN8 264 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 LYPD1Q8N2G4 141 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 TEX29Q8N6K0 151 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 FAM216BQ8N7L0 139 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 Q8N8P6 123 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 DNAJC30Q96LL9 226 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 CNFNQ9BYD5 112 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 BSNQ9UPA5 3926 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 MUC3AQ02505 3323 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 IGKV2-40A0A087WW87 121 aaPredicted RBP1.62□□□□□ -2.15
HPS3-203ENST00000460822 TRGV5A0A0B4J1U4 118 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 LOC107984156A0A0G2JMH3 177 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 A8MWV9 139 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 TMEM262E9PQX1 116 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 F8VRH5 84 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 CCDC179H3BU77 68 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 ZNF73O43830 326 aaPredicted RBP1.62□□□□□ -2.15
HPS3-203ENST00000460822 NDUFA3O95167 84 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 IGKV1-17P01599 117 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 IGKV2D-40P01614 121 aaPredicted RBP1.62□□□□□ -2.15
HPS3-203ENST00000460822 APELAP0DMC3 54 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 CCL3L1P16619 93 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 HIST1H4AP62805 103 aaKnown RBP1.62□□□□□ -2.15
HPS3-203ENST00000460822 PDE6HQ13956 83 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 PLGLAQ15195 96 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 VMA21Q3ZAQ7 101 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 PRR9Q5T870 116 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 SFTA2Q6UW10 78 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 IGFL1Q6UW32 110 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 ARL17AQ8IVW1 177 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 LINC00311Q8N616 119 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 MYOZ3Q8TDC0 251 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 PLEKHB2Q96CS7 222 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 MINOS1-NBL1R4GNA1 71 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 ZFHX3Q15911 3703 aa1.62□□□□□ -2.15
HPS3-203ENST00000460822 ROS1P08922 2347 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 ADGRG4Q8IZF6 3080 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 IGLV3-9A0A075B6K5 115 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 TRBV20-1A0A075B6N2 111 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 ZNF815PA8K554 130 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 I3L2K1 104 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 SNCGO76070 127 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 IFITM1P13164 125 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 HRES1P13985 223 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 COX6B1P14854 86 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 ASIPP42127 132 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 EFNA4P52798 201 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 NDUFA11Q86Y39 141 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 DEFB108BQ8NET1 73 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 Q8TAT8 98 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 PRADC1Q9BSG0 188 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 PIEZO2Q9H5I5 2752 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 LAMA5O15230 3695 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 DCHS2Q6V1P9 2916 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 PKDREJQ9NTG1 2253 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 TECTAO75443 2155 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 H3BT86 120 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 H3BVH4 76 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 K7EIM0 57 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 S100A4P26447 101 aaKnown RBP1.61□□□□□ -2.15
HPS3-203ENST00000460822 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 C10orf126Q8N4M7 172 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 ODF3Q96PU9 254 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 HIGD2AQ9BW72 106 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 SPANXA1Q9NS26 97 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 FAM215AQ9Y5M1 114 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 DMXL1Q9Y485 3027 aa1.61□□□□□ -2.15
HPS3-203ENST00000460822 MUC4Q99102 2169 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 TPRP12270 2363 aaKnown RBP1.6□□□□□ -2.15
HPS3-203ENST00000460822 A0A0J9YY99 117 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 C11orf86A6NJI1 115 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 C9JAW5 83 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 IGHV3-30P01768 117 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 IGHV3-30-5P0DP03 117 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 RPL28P46779 137 aaKnown RBP1.6□□□□□ -2.15
HPS3-203ENST00000460822 EMP1P54849 157 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 LINC01554Q52M75 96 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 MEIG1Q5JSS6 88 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 LINC01600Q96MT4 127 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 SMIM2Q9BVW6 85 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 LRBAP50851 2863 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 WNK2Q9Y3S1 2297 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 RP1L1Q8IWN7 2480 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms