RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 ZNF815PA8K554 130 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 HCRTO43612 131 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 DNAL4O96015 105 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 SPAG11BQ08648 103 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 C5orf56Q8N8D9 126 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 PPP1R1CQ8WVI7 109 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 ABCA9Q8IUA7 1624 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 CCDC180Q9P1Z9 1646 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 PDCD11Q14690 1871 aaKnown RBP1.24□□□□□ -2.21
TRGVB-201ENST00000453257 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
TRGVB-201ENST00000453257 NINQ8N4C6 2090 aa1.24□□□□□ -2.21
TRGVB-201ENST00000453257 NUP188Q5SRE5 1749 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 BRWD1Q9NSI6 2320 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 SDK1Q7Z5N4 2213 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 RAPGEF6Q8TEU7 1601 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 FAM223BA6NKX1 122 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 IQCF6A8MYZ5 107 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 DEFB121Q5J5C9 76 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 R4GMQ9 66 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 ARL2-SNX15V9GYD0 113 aa1.23□□□□□ -2.21
TRGVB-201ENST00000453257 ALKQ9UM73 1620 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 TNRC6BQ9UPQ9 1833 aaKnown RBP1.22□□□□□ -2.21
TRGVB-201ENST00000453257 A0A087WWC5 75 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 MYMXA0A1B0GTQ4 84 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 F8VRH5 84 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 SMIM13P0DJ93 91 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 PSENENQ9NZ42 101 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 V9GYV3 84 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 C1orf167Q5SNV9 1468 aa1.22□□□□□ -2.21
TRGVB-201ENST00000453257 CEP170BQ9Y4F5 1589 aaPredicted RBP1.21□□□□□ -2.22
TRGVB-201ENST00000453257 RP1P56715 2156 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 MED12Q93074 2177 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 ASXL1Q8IXJ9 1541 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 SHPRHQ149N8 1683 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 UMAD1C9J7I0 102 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 ARMS2P0C7Q2 107 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 FXYD4P59646 89 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 PLGLAQ15195 96 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 GDF5OSQ5U4N7 250 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 WFDC6Q9BQY6 131 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 PRR15LQ9BU68 103 aa1.21□□□□□ -2.22
TRGVB-201ENST00000453257 CRYBG1Q9Y4K1 1723 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 URB2Q14146 1524 aaKnown RBP1.2□□□□□ -2.22
TRGVB-201ENST00000453257 PLCH1Q4KWH8 1693 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 MED13Q9UHV7 2174 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 CD163L1Q9NR16 1453 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.2□□□□□ -2.22
TRGVB-201ENST00000453257 C7orf77A4D0Y5 90 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 CEBPZOSA8MTT3 80 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 M0R135 149 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 UQCR11O14957 56 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 Q6JHZ5 121 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 LINC00208Q96KT6 92 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 IFT172Q9UG01 1749 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 KIF1AQ12756 1690 aa1.2□□□□□ -2.22
TRGVB-201ENST00000453257 NKTRP30414 1462 aaKnown RBP1.19□□□□□ -2.22
TRGVB-201ENST00000453257 PIK3C2BO00750 1634 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 KIAA0100Q14667 2235 aaKnown RBP1.19□□□□□ -2.22
TRGVB-201ENST00000453257 RTTNQ86VV8 2226 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 A0A1B0GWA3 101 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 FXYD1O00168 92 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 PLXNC1O60486 1568 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 LEPROTL1O95214 131 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 MGPP08493 103 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 ZNF137PP52743 207 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 BAGE3Q86Y29 109 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 BAGE2Q86Y30 109 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 RP1L1Q8IWN7 2480 aaPredicted RBP1.19□□□□□ -2.22
TRGVB-201ENST00000453257 Q96NJ1 140 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 PROK2Q9HC23 129 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 LMTK2Q8IWU2 1503 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 UNC13CQ8NB66 2214 aa1.19□□□□□ -2.22
TRGVB-201ENST00000453257 ABCA6Q8N139 1617 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 CICQ96RK0 1608 aaPredicted RBP1.18□□□□□ -2.22
TRGVB-201ENST00000453257 ATP7BP35670 1465 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 ARFGEF3Q5TH69 2177 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 PKD1L3Q7Z443 1732 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 CDC42BPGQ6DT37 1551 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 PCDH15Q96QU1 1955 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 A0A087WVE0 104 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 CTXND1A0A1B0GTU2 59 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 D6R8Y8 96 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 CAV3P56539 151 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
TRGVB-201ENST00000453257 ATP5EP2Q5VTU8 51 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 Q6ZQY7 126 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 MUSTN1Q8IVN3 82 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 LINC00846Q9NV44 126 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 PLAC8Q9NZF1 115 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 UBE2D4Q9Y2X8 147 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 C5P01031 1676 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 NHSL1Q5SYE7 1610 aa1.18□□□□□ -2.22
TRGVB-201ENST00000453257 ZNF236Q9UL36 1845 aa1.17□□□□□ -2.22
TRGVB-201ENST00000453257 TRAV1-2A0A0B4J238 106 aa1.17□□□□□ -2.22
TRGVB-201ENST00000453257 M0R3E3 92 aa1.17□□□□□ -2.22
TRGVB-201ENST00000453257 COX8AP10176 69 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms