RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 RPL37P61927 97 aaKnown RBP0.67□□□□□ -2.3
PMS1-218ENST00000452382 GNGT1P63211 74 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 ADIRFQ15847 76 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 UBE2DNLQ8IWF7 75 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 LCN9Q8WX39 176 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 RABAC1Q9UI14 185 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 KIF21AQ7Z4S6 1674 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 PRDM15P57071 1507 aaPredicted RBP0.67□□□□□ -2.3
PMS1-218ENST00000452382 SHROOM2Q13796 1616 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 NAV3Q8IVL0 2385 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 WNK3Q9BYP7 1800 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 AHCTF1Q8WYP5 2266 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 PPLO60437 1756 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 ARHGEF12Q9NZN5 1544 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 GVQW2A0A096LPI5 108 aaPredicted RBP0.66□□□□□ -2.3
PMS1-218ENST00000452382 KANTRA0A1W2PQU2 76 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 D6R8Y8 96 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 H7BZZ5 65 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 PIN1P1O15428 100 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 NMBP08949 121 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 SPINK9Q5DT21 86 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 Q6JHZ5 121 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 MUSTN1Q8IVN3 82 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 CACNA1CQ13936 2221 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 PLIN4Q96Q06 1357 aa0.66□□□□□ -2.3
PMS1-218ENST00000452382 ASXL3Q9C0F0 2248 aa0.65□□□□□ -2.3
PMS1-218ENST00000452382 ABCC3O15438 1527 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 ZMYM4Q5VZL5 1548 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 EHBP1L1Q8N3D4 1523 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 A0A087WVE0 104 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 A0A096LNT2 108 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 F8WEM9 126 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 H3BQF6 201 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 ARMS2P0C7Q2 107 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 SNRPFP62306 86 aaKnown RBP0.65□□□□□ -2.31
PMS1-218ENST00000452382 HIGD1BQ9P298 99 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 SPCS1Q9Y6A9 102 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 ANKRD36A6QL64 1941 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 ATP10BO94823 1461 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 IQSEC2Q5JU85 1478 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 MYOM1P52179 1685 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 SCN7AQ01118 1682 aa0.65□□□□□ -2.31
PMS1-218ENST00000452382 CDK13Q14004 1512 aaKnown RBP0.64□□□□□ -2.31
PMS1-218ENST00000452382 PLXNB2O15031 1838 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 BCE1O60756 84 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 HMGN3Q15651 99 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 ALKAL2Q6UX46 152 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 DEFB107AQ8IZN7 70 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 TMEM263Q8WUH6 116 aaKnown RBP0.64□□□□□ -2.31
PMS1-218ENST00000452382 ST20Q9HBF5 79 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 PROK2Q9HC23 129 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 GOLGA4Q13439 2230 aaKnown RBP0.64□□□□□ -2.31
PMS1-218ENST00000452382 LRRC37A2A6NM11 1700 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 KNDC1Q76NI1 1749 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 HMGXB3Q12766 1538 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 ABCC2Q92887 1545 aa0.64□□□□□ -2.31
PMS1-218ENST00000452382 UNC13BO14795 1591 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 ERCC6L2Q5T890 1561 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 TRBV6-1A0A0K0K1D8 114 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 HMGN2P05204 90 aaKnown RBP0.63□□□□□ -2.31
PMS1-218ENST00000452382 ACYP1P07311 99 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 TDRG1Q3Y452 100 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 NMSQ5H8A3 153 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 C10orf113Q5VZT2 155 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 SSBP3-AS1Q7Z2R9 100 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 PSENENQ9NZ42 101 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 KIF20BQ96Q89 1820 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 NUP188Q5SRE5 1749 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 RAPGEF6Q8TEU7 1601 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 DOPEY2Q9Y3R5 2298 aa0.63□□□□□ -2.31
PMS1-218ENST00000452382 ARHGEF5Q12774 1597 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 DIP2CQ9Y2E4 1556 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 FANCAO15360 1455 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 MED14O60244 1454 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 ARHGAP35Q9NRY4 1499 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 A0A0D9SFI3 127 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 C10orf142B7Z368 130 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 G3V318 75 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 H0Y9P7 68 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 K7EIL1 84 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 WFDC2Q14508 124 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 PLGLAQ15195 96 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 KIF14Q15058 1648 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 PLCE1Q9P212 2302 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 EPRSP07814 1512 aaKnown RBP0.62□□□□□ -2.31
PMS1-218ENST00000452382 KDM3BQ7LBC6 1761 aa0.62□□□□□ -2.31
PMS1-218ENST00000452382 POLA1P09884 1462 aaPredicted RBP0.61□□□□□ -2.31
PMS1-218ENST00000452382 NRXN1Q9ULB1 1477 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 UBR3Q6ZT12 1888 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 MYO3AQ8NEV4 1616 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 FXYD6-FXYD2A0A087WZ82 144 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 CEBPZOSA8MTT3 80 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 IQCF6A8MYZ5 107 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 H3BUT2 72 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 COX6A2Q02221 97 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 C6orf201Q7Z4U5 140 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 LINC01600Q96MT4 127 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 LINC00846Q9NV44 126 aa0.61□□□□□ -2.31
PMS1-218ENST00000452382 COL4A6Q14031 1691 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms