RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
PMS1-218ENST00000452382 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
PMS1-218ENST00000452382 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
PMS1-218ENST00000452382 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
PMS1-218ENST00000452382 FOXD1Q16676 465 aa18.77■□□□□ 0.6
PMS1-218ENST00000452382 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
PMS1-218ENST00000452382 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
PMS1-218ENST00000452382 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
PMS1-218ENST00000452382 ADRA2BP18089 450 aa17.78■□□□□ 0.44
PMS1-218ENST00000452382 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
PMS1-218ENST00000452382 MSH5O43196 834 aa17.5■□□□□ 0.39
PMS1-218ENST00000452382 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PMS1-218ENST00000452382 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
PMS1-218ENST00000452382 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
PMS1-218ENST00000452382 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
PMS1-218ENST00000452382 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
PMS1-218ENST00000452382 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
PMS1-218ENST00000452382 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
PMS1-218ENST00000452382 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
PMS1-218ENST00000452382 KCNA4P22459 653 aa15.47■□□□□ 0.07
PMS1-218ENST00000452382 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
PMS1-218ENST00000452382 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
PMS1-218ENST00000452382 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
PMS1-218ENST00000452382 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
PMS1-218ENST00000452382 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
PMS1-218ENST00000452382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.043e-10■■□□□ 12.8
PMS1-218ENST00000452382 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
PMS1-218ENST00000452382 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
PMS1-218ENST00000452382 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
PMS1-218ENST00000452382 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
PMS1-218ENST00000452382 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
PMS1-218ENST00000452382 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
PMS1-218ENST00000452382 ZBTB22O15209 634 aa14.26□□□□□ -0.13
PMS1-218ENST00000452382 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
PMS1-218ENST00000452382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
PMS1-218ENST00000452382 CAPN15O75808 1086 aa14.21□□□□□ -0.13
PMS1-218ENST00000452382 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
PMS1-218ENST00000452382 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
PMS1-218ENST00000452382 APLP2Q06481 763 aa14.13□□□□□ -0.15
PMS1-218ENST00000452382 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
PMS1-218ENST00000452382 DSG3P32926 999 aa14.06□□□□□ -0.16
PMS1-218ENST00000452382 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
PMS1-218ENST00000452382 ABCB7O75027 752 aa13.95□□□□□ -0.18
PMS1-218ENST00000452382 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
PMS1-218ENST00000452382 POTEHQ6S545 545 aa13.94□□□□□ -0.18
PMS1-218ENST00000452382 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
PMS1-218ENST00000452382 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
PMS1-218ENST00000452382 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
PMS1-218ENST00000452382 POLA2Q14181 598 aa13.77□□□□□ -0.21
PMS1-218ENST00000452382 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
PMS1-218ENST00000452382 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
PMS1-218ENST00000452382 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
PMS1-218ENST00000452382 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
PMS1-218ENST00000452382 FBLN2P98095 1184 aa13.3□□□□□ -0.28
PMS1-218ENST00000452382 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
PMS1-218ENST00000452382 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
PMS1-218ENST00000452382 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
PMS1-218ENST00000452382 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
PMS1-218ENST00000452382 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
PMS1-218ENST00000452382 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
PMS1-218ENST00000452382 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
PMS1-218ENST00000452382 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
PMS1-218ENST00000452382 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
PMS1-218ENST00000452382 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
PMS1-218ENST00000452382 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
PMS1-218ENST00000452382 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
PMS1-218ENST00000452382 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
PMS1-218ENST00000452382 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
PMS1-218ENST00000452382 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
PMS1-218ENST00000452382 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
PMS1-218ENST00000452382 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
PMS1-218ENST00000452382 PROM2Q8N271 834 aa12.59□□□□□ -0.39
PMS1-218ENST00000452382 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
PMS1-218ENST00000452382 FKBP8Q14318 412 aa12.56□□□□□ -0.4
PMS1-218ENST00000452382 CHADLQ6NUI6 762 aa12.53□□□□□ -0.4
PMS1-218ENST00000452382 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
PMS1-218ENST00000452382 HAX1O00165 279 aa12.51□□□□□ -0.41
PMS1-218ENST00000452382 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
PMS1-218ENST00000452382 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
PMS1-218ENST00000452382 EVX2Q03828 476 aa12.33□□□□□ -0.44
PMS1-218ENST00000452382 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
PMS1-218ENST00000452382 PLSCR2Q9NRY7 297 aa12.27□□□□□ -0.45
PMS1-218ENST00000452382 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
PMS1-218ENST00000452382 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
PMS1-218ENST00000452382 MIER1Q8N108 512 aa12.18□□□□□ -0.46
PMS1-218ENST00000452382 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
PMS1-218ENST00000452382 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
PMS1-218ENST00000452382 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
PMS1-218ENST00000452382 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
PMS1-218ENST00000452382 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
PMS1-218ENST00000452382 GABBR2O75899 941 aa12.03□□□□□ -0.48
PMS1-218ENST00000452382 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
PMS1-218ENST00000452382 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
PMS1-218ENST00000452382 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
PMS1-218ENST00000452382 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
PMS1-218ENST00000452382 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
PMS1-218ENST00000452382 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
PMS1-218ENST00000452382 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
PMS1-218ENST00000452382 LHX8Q68G74 356 aa11.95□□□□□ -0.5
PMS1-218ENST00000452382 NUBP1P53384 320 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms