RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 SLC25A20O43772 301 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 UBE2DNLQ8IWF7 75 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 Q9UF83 564 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
PTPRR-204ENST00000440835 LYRM9A8MSI8 78 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 H3BS24 57 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 DEFB4AO15263 64 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
PTPRR-204ENST00000440835 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
PTPRR-204ENST00000440835 SCGB1C2P0DMR2 95 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 LAMTOR3Q9UHA4 124 aa4.27□□□□□ -1.73
PTPRR-204ENST00000440835 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 ATP5G1P05496 136 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 TMEM258P61165 79 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 SRSF9Q13242 221 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPRR-204ENST00000440835 C1orf134Q5TEV5 83 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
PTPRR-204ENST00000440835 ZNF575Q86XF7 245 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 NTN5Q8WTR8 489 aaPredicted RBP4.26□□□□□ -1.73
PTPRR-204ENST00000440835 IGLV2-18A0A075B6J9 118 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 UQCRQO14949 82 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 HERVK_113P63121 156 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 CELA1Q9UNI1 258 aa4.26□□□□□ -1.73
PTPRR-204ENST00000440835 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 CFC1P0CG37 223 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 IGFL4Q6B9Z1 124 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 TRAV8-4A0A0B4J246 113 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 J3QQQ9 107 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 SOCS3O14543 225 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 SH2D1AO60880 128 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 XCL2Q9UBD3 114 aa4.25□□□□□ -1.73
PTPRR-204ENST00000440835 EIF4EBP3O60516 100 aaPredicted RBP4.24□□□□□ -1.73
PTPRR-204ENST00000440835 NXT2Q9NPJ8 142 aaKnown RBP4.24□□□□□ -1.73
PTPRR-204ENST00000440835 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 M0R2P5 195 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 PLNP26678 52 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 DAD1P61803 113 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 ERCC8Q13216 396 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 C9orf153Q5TBE3 101 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 LINC00526Q96FQ7 95 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 AGPAT4-IT1Q9H0P7 198 aa4.24□□□□□ -1.73
PTPRR-204ENST00000440835 TRAV21A0A0B4J279 112 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 A0A0J9YX75 114 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 F8VRH5 84 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 FAM222AQ5U5X8 452 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 C3orf22Q8N5N4 141 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 Q8N8P6 123 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 Q8TAT8 98 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 DYNC1H1Q14204 4646 aaKnown RBP4.23□□□□□ -1.73
PTPRR-204ENST00000440835 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 INSP01308 110 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 PFN2P35080 140 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
PTPRR-204ENST00000440835 H3BNG1 76 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 H7C1H1 209 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 ZNF80P51504 273 aaPredicted RBP4.22□□□□□ -1.73
PTPRR-204ENST00000440835 ZNF56Q15929 161 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 A0A0J9YY99 117 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 CCL18P55774 89 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 C6orf223Q8N319 242 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 DPH3Q96FX2 82 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 TRAV26-2A0A0B4J265 109 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 NBDYA0A0U1RRE5 68 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 LAGE3Q14657 143 aa4.22□□□□□ -1.73
PTPRR-204ENST00000440835 TRAV12-1A0A0B4J245 112 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 VCYO14598 125 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 CRYGAP11844 174 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
PTPRR-204ENST00000440835 NRACQ8N912 160 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 C16orf74Q96GX8 76 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 NACAE9PAV3 2078 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
PTPRR-204ENST00000440835 S100A4P26447 101 aaKnown RBP4.21□□□□□ -1.74
PTPRR-204ENST00000440835 RNASE4P34096 147 aaKnown RBP4.21□□□□□ -1.74
PTPRR-204ENST00000440835 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 UBE2WQ96B02 151 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 LINC01600Q96MT4 127 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 UPK3BQ9BT76 320 aa4.21□□□□□ -1.74
PTPRR-204ENST00000440835 MUC4Q99102 2169 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms