RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE4Q13068 117 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE5Q13069 117 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 C12orf74Q32Q52 190 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE13Q4V321 117 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 ZFAND6Q6FIF0 208 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 VSIG2Q96IQ7 327 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-209ENST00000440653 K7EP13 123 aa6.46□□□□□ -1.38
HDAC6-209ENST00000440653 K7ERJ3 54 aa6.46□□□□□ -1.38
HDAC6-209ENST00000440653 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
HDAC6-209ENST00000440653 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 IGLL5B9A064 214 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 NDUFA1O15239 70 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 IGHV3-30P01768 117 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 IGHV3-30-5P0DP03 117 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 MIFP14174 115 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 FHL2Q14192 279 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 CEMP1Q6PRD7 247 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-209ENST00000440653 WFDC9Q8NEX5 89 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 X6R8D5 127 aa6.45□□□□□ -1.38
HDAC6-209ENST00000440653 HERC1Q15751 4861 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 IGLV5-39A0A0G2JS06 123 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 NHLRC4P0CG21 123 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-209ENST00000440653 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 RNF183Q96D59 192 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 Q9UF83 564 aa6.44□□□□□ -1.38
HDAC6-209ENST00000440653 ALMS1Q8TCU4 4167 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 IFITM1P13164 125 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
HDAC6-209ENST00000440653 C10orf126Q8N4M7 172 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
HDAC6-209ENST00000440653 DNAH10Q8IVF4 4471 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 TRAV26-1A0A087WT03 109 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 K7ERU9 68 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 SPINK8P0C7L1 97 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 HERV-K104P63124 156 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
HDAC6-209ENST00000440653 MIAQ16674 131 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 CDKN2A-AS1Q9UH64 79 aa6.42□□□□□ -1.38
HDAC6-209ENST00000440653 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 DEFB135Q30KP9 77 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 SH2D6Q7Z4S9 175 aa6.41□□□□□ -1.38
HDAC6-209ENST00000440653 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 TSPAN13O95857 204 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 GYPEP15421 78 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 DAD1P61803 113 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 FAM222AQ5U5X8 452 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 LITAFQ99732 161 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.38
HDAC6-209ENST00000440653 CHCHD5Q9BSY4 110 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.38
HDAC6-209ENST00000440653 TRAV13-1A0A0B4J241 112 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 LOC100131303A0A0U1RQF7 123 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 A8MZ25 164 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 F8W1H4 67 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 APOMO95445 188 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 ATP5G1P05496 136 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 Q8NAQ8 132 aa6.39□□□□□ -1.39
HDAC6-209ENST00000440653 A4D1N5 150 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 F5H768 121 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 PAX4O43316 350 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 GAGE6Q13070 117 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
HDAC6-209ENST00000440653 CFC1BP0CG36 223 aa6.37□□□□□ -1.39
HDAC6-209ENST00000440653 CFC1P0CG37 223 aa6.37□□□□□ -1.39
HDAC6-209ENST00000440653 IGHV4-30-4P0DP06 118 aa6.37□□□□□ -1.39
HDAC6-209ENST00000440653 Q9H8V8 135 aa6.37□□□□□ -1.39
HDAC6-209ENST00000440653 J3QR89 54 aa6.36□□□□□ -1.39
HDAC6-209ENST00000440653 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
HDAC6-209ENST00000440653 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
HDAC6-209ENST00000440653 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
HDAC6-209ENST00000440653 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-209ENST00000440653 C11orf68Q9H3H3 251 aaKnown RBP6.36□□□□□ -1.39
HDAC6-209ENST00000440653 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
HDAC6-209ENST00000440653 A0A087WZ39 114 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms