RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SIGMAR1Q99720 223 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
HDAC8-214ENST00000439122 SLC25A20O43772 301 aa8.58□□□□□ -1.04
HDAC8-214ENST00000439122 CIDEAO60543 219 aa8.58□□□□□ -1.04
HDAC8-214ENST00000439122 IFITM1P13164 125 aa8.58□□□□□ -1.04
HDAC8-214ENST00000439122 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
HDAC8-214ENST00000439122 NBEAL2Q6ZNJ1 2754 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 FHL2Q14192 279 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 ATXN8Q156A1 80 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 VWFP04275 2813 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 GAGE6Q13070 117 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 PRIMA1Q86XR5 153 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
HDAC8-214ENST00000439122 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
HDAC8-214ENST00000439122 F5H768 121 aa8.56□□□□□ -1.04
HDAC8-214ENST00000439122 LY6G6DO95868 133 aa8.56□□□□□ -1.04
HDAC8-214ENST00000439122 LINC00482Q8N8I6 264 aa8.56□□□□□ -1.04
HDAC8-214ENST00000439122 RNF183Q96D59 192 aa8.56□□□□□ -1.04
HDAC8-214ENST00000439122 CRLF1O75462 422 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 H7C423 109 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
HDAC8-214ENST00000439122 MEIG1Q5JSS6 88 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 CHCHD5Q9BSY4 110 aa8.55□□□□□ -1.04
HDAC8-214ENST00000439122 TRBV6-8A0A0A6YYG3 113 aa8.54□□□□□ -1.04
HDAC8-214ENST00000439122 COX6CP09669 75 aa8.54□□□□□ -1.04
HDAC8-214ENST00000439122 OTOGQ6ZRI0 2925 aa8.54□□□□□ -1.04
HDAC8-214ENST00000439122 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
HDAC8-214ENST00000439122 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
HDAC8-214ENST00000439122 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
HDAC8-214ENST00000439122 M0QXV9 152 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 HERV-K104P63124 156 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 KIR2DL5BQ8NHK3 375 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 CLEC2BQ92478 149 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 INAFM1C9JVW0 142 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 SPATA3Q8NHX4 192 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
HDAC8-214ENST00000439122 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-214ENST00000439122 TENM1Q9UKZ4 2725 aa8.5□□□□□ -1.05
HDAC8-214ENST00000439122 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
HDAC8-214ENST00000439122 GYPEP15421 78 aa8.5□□□□□ -1.05
HDAC8-214ENST00000439122 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
HDAC8-214ENST00000439122 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
HDAC8-214ENST00000439122 X6R8D5 127 aa8.49□□□□□ -1.05
HDAC8-214ENST00000439122 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
HDAC8-214ENST00000439122 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
HDAC8-214ENST00000439122 SCGB1A1P11684 91 aa8.48□□□□□ -1.05
HDAC8-214ENST00000439122 C9orf66Q5T8R8 295 aa8.48□□□□□ -1.05
HDAC8-214ENST00000439122 C2orf82Q6UX34 121 aa8.48□□□□□ -1.05
HDAC8-214ENST00000439122 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 A0A096LPF7 62 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 SMIM9A6NGZ8 99 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 LST1O00453 97 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
HDAC8-214ENST00000439122 DEFB4AO15263 64 aa8.46□□□□□ -1.05
HDAC8-214ENST00000439122 DEFB135Q30KP9 77 aa8.46□□□□□ -1.05
HDAC8-214ENST00000439122 PRO0255Q9UI72 69 aa8.46□□□□□ -1.05
HDAC8-214ENST00000439122 ATRQ13535 2644 aa8.46□□□□□ -1.06
HDAC8-214ENST00000439122 A0A087WZ39 114 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 XGP55808 180 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 LINC00959A0A1B0GUT2 108 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 LINC01600Q96MT4 127 aa8.45□□□□□ -1.06
HDAC8-214ENST00000439122 H3BT86 120 aa8.44□□□□□ -1.06
HDAC8-214ENST00000439122 LINC00158P58513 81 aa8.44□□□□□ -1.06
HDAC8-214ENST00000439122 PAX4O43316 350 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 XCL1P47992 114 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 LYRM9A8MSI8 78 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 COX7A2LO14548 114 aa8.43□□□□□ -1.06
HDAC8-214ENST00000439122 C11orf68Q9H3H3 251 aaKnown RBP8.42□□□□□ -1.06
HDAC8-214ENST00000439122 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
HDAC8-214ENST00000439122 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
HDAC8-214ENST00000439122 PFN2P35080 140 aa8.42□□□□□ -1.06
HDAC8-214ENST00000439122 APOC4P55056 127 aa8.42□□□□□ -1.06
HDAC8-214ENST00000439122 SS18Q15532 418 aa8.42□□□□□ -1.06
HDAC8-214ENST00000439122 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
HDAC8-214ENST00000439122 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
HDAC8-214ENST00000439122 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
HDAC8-214ENST00000439122 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
HDAC8-214ENST00000439122 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
HDAC8-214ENST00000439122 CRPP02741 224 aa8.41□□□□□ -1.06
HDAC8-214ENST00000439122 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
HDAC8-214ENST00000439122 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
HDAC8-214ENST00000439122 DAD1P61803 113 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms