RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
HOXC4-202ENST00000430889 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
HOXC4-202ENST00000430889 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 IFITM1P13164 125 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
HOXC4-202ENST00000430889 GAGE6Q13070 117 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 LYRM7Q5U5X0 104 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 LOC107984156A0A0G2JMH3 177 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 TCL1BO95988 128 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 ARL17AQ8IVW1 177 aa9.74□□□□□ -0.85
HOXC4-202ENST00000430889 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
HOXC4-202ENST00000430889 APOC4P55056 127 aa9.73□□□□□ -0.85
HOXC4-202ENST00000430889 RNF151Q2KHN1 245 aa9.73□□□□□ -0.85
HOXC4-202ENST00000430889 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
HOXC4-202ENST00000430889 Q9H8V8 135 aa9.73□□□□□ -0.85
HOXC4-202ENST00000430889 GYPEP15421 78 aa9.72□□□□□ -0.85
HOXC4-202ENST00000430889 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
HOXC4-202ENST00000430889 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
HOXC4-202ENST00000430889 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
HOXC4-202ENST00000430889 PSMB2P49721 201 aa9.71□□□□□ -0.85
HOXC4-202ENST00000430889 MTURNQ8N3F0 131 aa9.71□□□□□ -0.85
HOXC4-202ENST00000430889 Q8NAQ8 132 aa9.71□□□□□ -0.85
HOXC4-202ENST00000430889 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.85
HOXC4-202ENST00000430889 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.86
HOXC4-202ENST00000430889 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
HOXC4-202ENST00000430889 PRSS2P07478 247 aa9.71□□□□□ -0.86
HOXC4-202ENST00000430889 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
HOXC4-202ENST00000430889 TRRAPQ9Y4A5 3859 aa9.7□□□□□ -0.86
HOXC4-202ENST00000430889 IGHV4-28A0A0C4DH34 117 aa9.7□□□□□ -0.86
HOXC4-202ENST00000430889 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
HOXC4-202ENST00000430889 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
HOXC4-202ENST00000430889 CHCHD5Q9BSY4 110 aa9.7□□□□□ -0.86
HOXC4-202ENST00000430889 TRBV30A0A0K0K1B3 111 aa9.69□□□□□ -0.86
HOXC4-202ENST00000430889 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
HOXC4-202ENST00000430889 HERV-K104P63124 156 aa9.69□□□□□ -0.86
HOXC4-202ENST00000430889 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
HOXC4-202ENST00000430889 DAND5Q8N907 189 aa9.68□□□□□ -0.86
HOXC4-202ENST00000430889 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
HOXC4-202ENST00000430889 VPS25Q9BRG1 176 aa9.68□□□□□ -0.86
HOXC4-202ENST00000430889 CMYA5Q8N3K9 4069 aa9.68□□□□□ -0.86
HOXC4-202ENST00000430889 MIFP14174 115 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
HOXC4-202ENST00000430889 ATRQ13535 2644 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 A0A087WZ39 114 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 LINC00959A0A1B0GUT2 108 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 TRIAP1O43715 76 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 NPC2P61916 151 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
HOXC4-202ENST00000430889 F8P00451 2351 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 DEFB4AO15263 64 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 PAX4O43316 350 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 IGHV4-30-4P0DP06 118 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 COX7B2Q8TF08 81 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
HOXC4-202ENST00000430889 M0QXV9 152 aa9.65□□□□□ -0.86
HOXC4-202ENST00000430889 SCGB1C2P0DMR2 95 aa9.65□□□□□ -0.86
HOXC4-202ENST00000430889 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
HOXC4-202ENST00000430889 H7C2G1 150 aa9.64□□□□□ -0.87
HOXC4-202ENST00000430889 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
HOXC4-202ENST00000430889 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
HOXC4-202ENST00000430889 DAD1P61803 113 aa9.64□□□□□ -0.87
HOXC4-202ENST00000430889 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
HOXC4-202ENST00000430889 Q1RN00 199 aa9.63□□□□□ -0.87
HOXC4-202ENST00000430889 IGKV3OR2-268A0A0C4DH90 116 aa9.62□□□□□ -0.87
HOXC4-202ENST00000430889 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
HOXC4-202ENST00000430889 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
HOXC4-202ENST00000430889 ATP5G1P05496 136 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 A0A096LPF7 62 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 FOXI1Q12951 378 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 LINC01620Q4KN68 170 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
HOXC4-202ENST00000430889 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
HOXC4-202ENST00000430889 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
HOXC4-202ENST00000430889 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
HOXC4-202ENST00000430889 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
HOXC4-202ENST00000430889 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
HOXC4-202ENST00000430889 J3QR89 54 aa9.59□□□□□ -0.87
HOXC4-202ENST00000430889 SLC25A20O43772 301 aa9.59□□□□□ -0.87
HOXC4-202ENST00000430889 C9JAW5 83 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 EGFEM1PQ0D2K5 195 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 SS18Q15532 418 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 ANKRD29Q8N6D5 301 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 SPATA25Q9BR10 227 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
HOXC4-202ENST00000430889 LST1O00453 97 aa9.57□□□□□ -0.88
HOXC4-202ENST00000430889 PCP4P48539 62 aa9.57□□□□□ -0.88
HOXC4-202ENST00000430889 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
HOXC4-202ENST00000430889 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
HOXC4-202ENST00000430889 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms