RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 NTM-AS1Q6ZSK4 140 aa9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
SNRNP200-202ENST00000429650 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
SNRNP200-202ENST00000429650 NDUFA7O95182 113 aa9.51□□□□□ -0.89
SNRNP200-202ENST00000429650 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
SNRNP200-202ENST00000429650 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
SNRNP200-202ENST00000429650 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 COX6CP09669 75 aa9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 DAZ2Q13117 558 aaKnown RBP9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 Q9H8V8 135 aa9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 RPL13AP40429 203 aaKnown RBP9.5□□□□□ -0.89
SNRNP200-202ENST00000429650 SMIM1B2RUZ4 78 aa9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 WFDC11Q8NEX6 87 aa9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 NBEAL2Q6ZNJ1 2754 aa9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
SNRNP200-202ENST00000429650 TEX29Q8N6K0 151 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 NOP10Q9NPE3 64 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 H7C423 109 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 GIG44P09565 113 aaPredicted RBP9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
SNRNP200-202ENST00000429650 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
SNRNP200-202ENST00000429650 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
SNRNP200-202ENST00000429650 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-202ENST00000429650 LST1O00453 97 aa9.47□□□□□ -0.89
SNRNP200-202ENST00000429650 FN1P02751 2386 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-202ENST00000429650 H3BT86 120 aa9.46□□□□□ -0.9
SNRNP200-202ENST00000429650 J3KT08 172 aa9.46□□□□□ -0.9
SNRNP200-202ENST00000429650 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
SNRNP200-202ENST00000429650 PRO0628Q9UI54 55 aa9.46□□□□□ -0.9
SNRNP200-202ENST00000429650 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
SNRNP200-202ENST00000429650 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
SNRNP200-202ENST00000429650 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
SNRNP200-202ENST00000429650 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-202ENST00000429650 SOSTDC1Q6X4U4 206 aa9.44□□□□□ -0.9
SNRNP200-202ENST00000429650 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
SNRNP200-202ENST00000429650 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
SNRNP200-202ENST00000429650 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
SNRNP200-202ENST00000429650 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
SNRNP200-202ENST00000429650 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 LINC01006Q8NI28 216 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 PDZD2O15018 2839 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 VWFP04275 2813 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 UBE2L6O14933 153 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
SNRNP200-202ENST00000429650 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 LOC100131303A0A0U1RQF7 123 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 MALP21145 153 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
SNRNP200-202ENST00000429650 TRBV6-4A0A1B0GX49 114 aa9.41□□□□□ -0.9
SNRNP200-202ENST00000429650 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
SNRNP200-202ENST00000429650 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 OVOL2Q9BRP0 275 aa9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 C16orf95Q9H693 158 aa9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 ANK3Q12955 4377 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 PKIGQ9Y2B9 76 aa9.4□□□□□ -0.9
SNRNP200-202ENST00000429650 A0A1B0GX51 115 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 RNASE1P07998 156 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 KRTAP1-1Q07627 177 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 COX7A2LO14548 114 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 CRLF1O75462 422 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 SNCGO76070 127 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
SNRNP200-202ENST00000429650 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
SNRNP200-202ENST00000429650 RETNQ9HD89 108 aa9.38□□□□□ -0.91
SNRNP200-202ENST00000429650 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-202ENST00000429650 DEFB121Q5J5C9 76 aa9.38□□□□□ -0.91
SNRNP200-202ENST00000429650 UNC79Q9P2D8 2635 aa9.38□□□□□ -0.91
SNRNP200-202ENST00000429650 RPS28P62857 69 aaKnown RBP9.37□□□□□ -0.91
SNRNP200-202ENST00000429650 FHL2Q14192 279 aa9.36□□□□□ -0.91
SNRNP200-202ENST00000429650 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 GAGE2BQ13066 116 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 OTOGQ6ZRI0 2925 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 FAM240AA0A1B0GVK7 77 aa9.35□□□□□ -0.91
SNRNP200-202ENST00000429650 HRCT1Q6UXD1 115 aa9.34□□□□□ -0.91
SNRNP200-202ENST00000429650 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
SNRNP200-202ENST00000429650 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
SNRNP200-202ENST00000429650 Q6Q795 121 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms