RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
THBS3-202ENST00000428962 A8MZ25 164 aa9.69□□□□□ -0.86
THBS3-202ENST00000428962 FHL2Q14192 279 aa9.69□□□□□ -0.86
THBS3-202ENST00000428962 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
THBS3-202ENST00000428962 SIGMAR1Q99720 223 aa9.69□□□□□ -0.86
THBS3-202ENST00000428962 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 TCL1BO95988 128 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 Q1RN00 199 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
THBS3-202ENST00000428962 ATP6V0E2Q8NHE4 81 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
THBS3-202ENST00000428962 ADAMTSL4-AS1Q5T5F5 129 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
THBS3-202ENST00000428962 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
THBS3-202ENST00000428962 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
THBS3-202ENST00000428962 Q9H8V8 135 aa9.66□□□□□ -0.86
THBS3-202ENST00000428962 H7C2G1 150 aa9.66□□□□□ -0.86
THBS3-202ENST00000428962 HERV-K104P63124 156 aa9.66□□□□□ -0.86
THBS3-202ENST00000428962 MDFIQ99750 246 aa9.66□□□□□ -0.86
THBS3-202ENST00000428962 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
THBS3-202ENST00000428962 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
THBS3-202ENST00000428962 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
THBS3-202ENST00000428962 F5H768 121 aa9.64□□□□□ -0.87
THBS3-202ENST00000428962 GAGE6Q13070 117 aa9.64□□□□□ -0.87
THBS3-202ENST00000428962 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
THBS3-202ENST00000428962 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
THBS3-202ENST00000428962 ATXN8Q156A1 80 aa9.63□□□□□ -0.87
THBS3-202ENST00000428962 X6R8D5 127 aa9.63□□□□□ -0.87
THBS3-202ENST00000428962 LYRM9A8MSI8 78 aa9.63□□□□□ -0.87
THBS3-202ENST00000428962 APOC4P55056 127 aa9.63□□□□□ -0.87
THBS3-202ENST00000428962 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
THBS3-202ENST00000428962 M0QXV9 152 aa9.62□□□□□ -0.87
THBS3-202ENST00000428962 COX6CP09669 75 aa9.62□□□□□ -0.87
THBS3-202ENST00000428962 NPC2P61916 151 aa9.62□□□□□ -0.87
THBS3-202ENST00000428962 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
THBS3-202ENST00000428962 ICOSQ9Y6W8 199 aa9.62□□□□□ -0.87
THBS3-202ENST00000428962 CUBNO60494 3623 aa9.62□□□□□ -0.87
THBS3-202ENST00000428962 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 GAGE12HA6NDE8 117 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 TRIAP1O43715 76 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 FOXI1Q12951 378 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 SPATA3Q8NHX4 192 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 PRO0255Q9UI72 69 aa9.61□□□□□ -0.87
THBS3-202ENST00000428962 ATRQ13535 2644 aa9.6□□□□□ -0.87
THBS3-202ENST00000428962 GYPEP15421 78 aa9.6□□□□□ -0.87
THBS3-202ENST00000428962 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
THBS3-202ENST00000428962 CITED1Q99966 193 aa9.6□□□□□ -0.87
THBS3-202ENST00000428962 RPL13AP40429 203 aaKnown RBP9.59□□□□□ -0.87
THBS3-202ENST00000428962 DAND5Q8N907 189 aa9.59□□□□□ -0.87
THBS3-202ENST00000428962 IGLV4-60A0A075B6I1 120 aa9.59□□□□□ -0.88
THBS3-202ENST00000428962 C9JAW5 83 aa9.59□□□□□ -0.88
THBS3-202ENST00000428962 SLC25A20O43772 301 aa9.59□□□□□ -0.88
THBS3-202ENST00000428962 COX7B2Q8TF08 81 aa9.59□□□□□ -0.88
THBS3-202ENST00000428962 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
THBS3-202ENST00000428962 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
THBS3-202ENST00000428962 FBN1P35555 2871 aaKnown RBP9.57□□□□□ -0.88
THBS3-202ENST00000428962 IGKV3OR2-268A0A0C4DH90 116 aa9.57□□□□□ -0.88
THBS3-202ENST00000428962 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
THBS3-202ENST00000428962 DEFB135Q30KP9 77 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 KRTAP24-1Q3LI83 254 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 PAX4O43316 350 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 CKS1BP61024 79 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
THBS3-202ENST00000428962 A0A087WZ39 114 aa9.55□□□□□ -0.88
THBS3-202ENST00000428962 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
THBS3-202ENST00000428962 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
THBS3-202ENST00000428962 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
THBS3-202ENST00000428962 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 MIFP14174 115 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 DAD1P61803 113 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 SS18Q15532 418 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
THBS3-202ENST00000428962 SOSTDC1Q6X4U4 206 aa9.53□□□□□ -0.88
THBS3-202ENST00000428962 WIPF1O43516 503 aa9.52□□□□□ -0.89
THBS3-202ENST00000428962 WFDC9Q8NEX5 89 aa9.52□□□□□ -0.89
THBS3-202ENST00000428962 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
THBS3-202ENST00000428962 H3BT86 120 aa9.52□□□□□ -0.89
THBS3-202ENST00000428962 LST1O00453 97 aa9.52□□□□□ -0.89
THBS3-202ENST00000428962 TRAV26-1A0A087WT03 109 aa9.51□□□□□ -0.89
THBS3-202ENST00000428962 ATP5G1P05496 136 aa9.51□□□□□ -0.89
THBS3-202ENST00000428962 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
THBS3-202ENST00000428962 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
THBS3-202ENST00000428962 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
THBS3-202ENST00000428962 Q8NAQ8 132 aa9.5□□□□□ -0.89
THBS3-202ENST00000428962 DNHD1Q96M86 4753 aa9.5□□□□□ -0.89
THBS3-202ENST00000428962 TRAV13-2A0A0B4J235 113 aa9.49□□□□□ -0.89
THBS3-202ENST00000428962 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
THBS3-202ENST00000428962 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
THBS3-202ENST00000428962 A0A096LPF7 62 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms