RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PLXNB1O43157 2135 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 H3BQ85 93 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 C20orf197Q8N268 126 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 Q6ZQY7 126 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 RNASE8Q8TDE3 154 aaKnown RBP9.59□□□□□ -0.87
SPG11-202ENST00000427534 RNASE3P12724 160 aaKnown RBP9.59□□□□□ -0.87
SPG11-202ENST00000427534 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 TRIAP1O43715 76 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 TSHBP01222 138 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 NDUFV3P56181 108 aaKnown RBP9.59□□□□□ -0.87
SPG11-202ENST00000427534 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 H3BT86 120 aa9.59□□□□□ -0.87
SPG11-202ENST00000427534 LELP1Q5T871 98 aa9.59□□□□□ -0.88
SPG11-202ENST00000427534 TET2Q6N021 2002 aaPredicted RBP9.58□□□□□ -0.88
SPG11-202ENST00000427534 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
SPG11-202ENST00000427534 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
SPG11-202ENST00000427534 U3KQK5 164 aa9.58□□□□□ -0.88
SPG11-202ENST00000427534 A0A0U1RQV1 116 aa9.57□□□□□ -0.88
SPG11-202ENST00000427534 SPINK1P00995 79 aa9.57□□□□□ -0.88
SPG11-202ENST00000427534 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
SPG11-202ENST00000427534 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
SPG11-202ENST00000427534 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
SPG11-202ENST00000427534 CD164L2Q6UWJ8 174 aa9.56□□□□□ -0.88
SPG11-202ENST00000427534 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
SPG11-202ENST00000427534 HCFC1P51610 2035 aa9.56□□□□□ -0.88
SPG11-202ENST00000427534 A0A1W2PPR1 153 aa9.56□□□□□ -0.88
SPG11-202ENST00000427534 NAV3Q8IVL0 2385 aa9.55□□□□□ -0.88
SPG11-202ENST00000427534 H7C423 109 aa9.55□□□□□ -0.88
SPG11-202ENST00000427534 CACNA1AO00555 2505 aa9.55□□□□□ -0.88
SPG11-202ENST00000427534 SMIM11BQ8TCY0 68 aa9.55□□□□□ -0.88
SPG11-202ENST00000427534 Q6ZVQ6 151 aa9.55□□□□□ -0.88
SPG11-202ENST00000427534 ATG2AQ2TAZ0 1938 aa9.54□□□□□ -0.88
SPG11-202ENST00000427534 IGHV6-1A0A0B4J1U7 121 aa9.54□□□□□ -0.88
SPG11-202ENST00000427534 COX6A2Q02221 97 aa9.54□□□□□ -0.88
SPG11-202ENST00000427534 MT-ATP8P03928 68 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 ESRGQ1W209 222 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 IGLV1-40P01703 118 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 M0R378 163 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 XGP55808 180 aa9.53□□□□□ -0.88
SPG11-202ENST00000427534 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.88
SPG11-202ENST00000427534 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.88
SPG11-202ENST00000427534 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
SPG11-202ENST00000427534 Q6Q795 121 aa9.52□□□□□ -0.89
SPG11-202ENST00000427534 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
SPG11-202ENST00000427534 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.89
SPG11-202ENST00000427534 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
SPG11-202ENST00000427534 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
SPG11-202ENST00000427534 PIEZO2Q9H5I5 2752 aa9.5□□□□□ -0.89
SPG11-202ENST00000427534 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
SPG11-202ENST00000427534 KLLNB2CW77 178 aa9.5□□□□□ -0.89
SPG11-202ENST00000427534 A8MTW9 85 aa9.49□□□□□ -0.89
SPG11-202ENST00000427534 NRACQ8N912 160 aa9.49□□□□□ -0.89
SPG11-202ENST00000427534 ABCA2Q9BZC7 2435 aa9.48□□□□□ -0.89
SPG11-202ENST00000427534 PYGO1Q9Y3Y4 419 aa9.48□□□□□ -0.89
SPG11-202ENST00000427534 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
SPG11-202ENST00000427534 ADAMTS20P59510 1910 aa9.48□□□□□ -0.89
SPG11-202ENST00000427534 MRPS12O15235 138 aaKnown RBP9.48□□□□□ -0.89
SPG11-202ENST00000427534 PDE6GP18545 87 aa9.48□□□□□ -0.89
SPG11-202ENST00000427534 REG3GQ6UW15 175 aa9.48□□□□□ -0.89
SPG11-202ENST00000427534 Q6ZSN1 163 aa9.47□□□□□ -0.89
SPG11-202ENST00000427534 NDUFC2O95298 119 aa9.47□□□□□ -0.89
SPG11-202ENST00000427534 ZNF580Q9UK33 172 aa9.46□□□□□ -0.89
SPG11-202ENST00000427534 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.9
SPG11-202ENST00000427534 K7ERS5 55 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 PRLHP81277 87 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 FSHBP01225 129 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 DHRS4-AS1Q9P1J3 65 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 NAV2Q8IVL1 2488 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 CDC42SE2Q9NRR3 84 aa9.45□□□□□ -0.9
SPG11-202ENST00000427534 UTRNP46939 3433 aa9.44□□□□□ -0.9
SPG11-202ENST00000427534 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
SPG11-202ENST00000427534 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
SPG11-202ENST00000427534 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
SPG11-202ENST00000427534 J3KT08 172 aa9.44□□□□□ -0.9
SPG11-202ENST00000427534 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
SPG11-202ENST00000427534 NCOR2Q9Y618 2525 aa9.43□□□□□ -0.9
SPG11-202ENST00000427534 LINC00474Q9P2X8 69 aa9.43□□□□□ -0.9
SPG11-202ENST00000427534 FHL2Q14192 279 aa9.42□□□□□ -0.9
SPG11-202ENST00000427534 MUC4Q99102 2169 aa9.42□□□□□ -0.9
SPG11-202ENST00000427534 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
SPG11-202ENST00000427534 MDFIQ99750 246 aa9.41□□□□□ -0.9
SPG11-202ENST00000427534 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
SPG11-202ENST00000427534 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
SPG11-202ENST00000427534 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
SPG11-202ENST00000427534 Q9BRP9 147 aa9.4□□□□□ -0.9
SPG11-202ENST00000427534 A0A087WYN8 130 aa9.4□□□□□ -0.9
SPG11-202ENST00000427534 Q8N9L7 120 aa9.4□□□□□ -0.9
SPG11-202ENST00000427534 C2orf91Q6ZV80 131 aa9.4□□□□□ -0.9
SPG11-202ENST00000427534 AGRNO00468 2067 aa9.39□□□□□ -0.91
SPG11-202ENST00000427534 TIMM17BO60830 172 aa9.39□□□□□ -0.91
SPG11-202ENST00000427534 IGF2RP11717 2491 aa9.39□□□□□ -0.91
SPG11-202ENST00000427534 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
SPG11-202ENST00000427534 CCDC168Q8NDH2 2452 aa9.39□□□□□ -0.91
SPG11-202ENST00000427534 A6NED7 52 aa9.38□□□□□ -0.91
SPG11-202ENST00000427534 EML5Q05BV3 1969 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms