RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 XCL2Q9UBD3 114 aa3.71□□□□□ -1.82
ZNF440-203ENST00000427505 ERG28Q9UKR5 140 aa3.71□□□□□ -1.82
ZNF440-203ENST00000427505 CSPG4Q6UVK1 2322 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.7□□□□□ -1.82
ZNF440-203ENST00000427505 IGHV3OR16-12A0A075B7B8 117 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 TRGV1A0A0A0MS02 117 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 PLAC8L1A1L4L8 177 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 IGKV2-29A2NJV5 120 aaPredicted RBP3.7□□□□□ -1.82
ZNF440-203ENST00000427505 TCL1BO95988 128 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 LINC00694P0DN24 101 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 HERV-K104P63124 156 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 ETDBQ3ZM63 59 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 LINC00242Q5T6M2 205 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 CITED2Q99967 270 aaPredicted RBP3.7□□□□□ -1.82
ZNF440-203ENST00000427505 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
ZNF440-203ENST00000427505 DOPEY2Q9Y3R5 2298 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 TRAV8-3A0A0A6YYJ7 113 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 J3QKU1 62 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 PSMB2P49721 201 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 INSL3P51460 131 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
ZNF440-203ENST00000427505 ATXN8Q156A1 80 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 CEMP1Q6PRD7 247 aaPredicted RBP3.69□□□□□ -1.82
ZNF440-203ENST00000427505 SFTA2Q6UW10 78 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 Q6ZTI0 123 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 TMEM101Q96IK0 257 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 SIGMAR1Q99720 223 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 Q9UF83 564 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 CDKN2A-AS1Q9UH64 79 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 POLQO75417 2590 aa3.69□□□□□ -1.82
ZNF440-203ENST00000427505 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 TMEM262E9PQX1 116 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 F5H768 121 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 H3BT86 120 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 PRM2P04554 102 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 COX6CP09669 75 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 SPINK8P0C7L1 97 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
ZNF440-203ENST00000427505 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 NTM-AS1Q6ZSK4 140 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 KIR2DL5BQ8NHK3 375 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 DEFB104AQ8WTQ1 72 aa3.68□□□□□ -1.82
ZNF440-203ENST00000427505 ZNF625Q96I27 306 aaPredicted RBP3.68□□□□□ -1.82
ZNF440-203ENST00000427505 ASH1LQ9NR48 2969 aaKnown RBP3.67□□□□□ -1.82
ZNF440-203ENST00000427505 MYO9AB2RTY4 2548 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 IGHV3-38A0A0C4DH36 116 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 TRBV10-2A0A0K0K1G8 114 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 SLC25A20O43772 301 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 SCGB1C2P0DMR2 95 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 VPREB1P12018 145 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 LINC01620Q4KN68 170 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
ZNF440-203ENST00000427505 FAM222AQ5U5X8 452 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 LINC01561Q8N1V8 128 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.67□□□□□ -1.82
ZNF440-203ENST00000427505 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
ZNF440-203ENST00000427505 ICOSQ9Y6W8 199 aa3.67□□□□□ -1.82
ZNF440-203ENST00000427505 ABCA12Q86UK0 2595 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 ITPR3Q14573 2671 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 TRGV2A0A075B6R0 118 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 TRBV6-8A0A0A6YYG3 113 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 LST1O00453 97 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 UBE2L6O14933 153 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 COX6A2Q02221 97 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 Q1RN00 199 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 ANKRD29Q8N6D5 301 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 CARD19Q96LW7 228 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 Q9H8V8 135 aa3.66□□□□□ -1.82
ZNF440-203ENST00000427505 EPG5Q9HCE0 2579 aa3.65□□□□□ -1.82
ZNF440-203ENST00000427505 UTP20O75691 2785 aaKnown RBP3.65□□□□□ -1.82
ZNF440-203ENST00000427505 MXRA5Q9NR99 2828 aa3.65□□□□□ -1.82
ZNF440-203ENST00000427505 TRGV4A0A0C4DH28 118 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 LYRM9A8MSI8 78 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 C9JAW5 83 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 COX7A2LO14548 114 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 GAGE5Q13069 117 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 GAGE6Q13070 117 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 DEFB121Q5J5C9 76 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 Q75L30 129 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 CENPEQ02224 2701 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 CELSR1Q9NYQ6 3014 aa3.65□□□□□ -1.83
ZNF440-203ENST00000427505 NACAE9PAV3 2078 aa3.64□□□□□ -1.83
ZNF440-203ENST00000427505 AGRNO00468 2067 aa3.64□□□□□ -1.83
ZNF440-203ENST00000427505 APCP25054 2843 aa3.64□□□□□ -1.83
ZNF440-203ENST00000427505 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
ZNF440-203ENST00000427505 A0A087WZ39 114 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms