RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 LINC00467Q9BRT7 94 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 VPREB3Q9UKI3 123 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 MED13LQ71F56 2210 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 IGHV1-58A0A0C4DH39 117 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 TINCRA0A1B0GVN0 87 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 SNCGO76070 127 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 IGHV3-33P01772 117 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 SPINK8P0C7L1 97 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 TSPEAR-AS2P59090 65 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 CKS1BP61024 79 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 CIRBPQ14011 172 aaKnown RBP3.52□□□□□ -1.85
LINC00458-202ENST00000427299 MIAQ16674 131 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 ZFAND6Q6FIF0 208 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 Q6ZR54 194 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 ZNRF2Q8NHG8 242 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 UBE2E2Q96LR5 201 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 AMELXQ99217 191 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 CR1P17927 2039 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 DOPEY2Q9Y3R5 2298 aa3.52□□□□□ -1.85
LINC00458-202ENST00000427299 CEP295Q9C0D2 2601 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 TRBV10-2A0A0K0K1G8 114 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 C9JAW5 83 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 EMP1P54849 157 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 HERVK_113P63121 156 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 SPINK13Q1W4C9 94 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 Q6Q795 121 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 Q6ZQT7 251 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 DYNLRB2Q8TF09 96 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 TMEM263Q8WUH6 116 aaKnown RBP3.51□□□□□ -1.85
LINC00458-202ENST00000427299 PRORYQ9H606 182 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 ICOSQ9Y6W8 199 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 AKAP6Q13023 2319 aa3.51□□□□□ -1.85
LINC00458-202ENST00000427299 ZFHX2Q9C0A1 2572 aaPredicted RBP3.51□□□□□ -1.85
LINC00458-202ENST00000427299 NBASA2RRP1 2371 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 TRAV12-2A0A075B6T6 113 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 TRAV8-4A0A0B4J246 113 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 NDUFA1O15239 70 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 SYNJ2BPP57105 145 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 DEFB1P60022 68 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 SFTA2Q6UW10 78 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 KLHL30-AS1Q8NEE0 82 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 CARD19Q96LW7 228 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 ANAPC13Q9BS18 74 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 IGF2RP11717 2491 aa3.5□□□□□ -1.85
LINC00458-202ENST00000427299 A0A0J9YXV3 536 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 C19orf84I3L1E1 186 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 IGHV3-53P01767 116 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 ACYP1P07311 99 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 INSL3P51460 131 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 BLCAPP62952 87 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 FAM222AQ5U5X8 452 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 TMEM61Q8N0U2 210 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 C4orf3Q8WVX3 66 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 VSIG2Q96IQ7 327 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 UBE2D4Q9Y2X8 147 aa3.49□□□□□ -1.85
LINC00458-202ENST00000427299 CSMD1Q96PZ7 3565 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 IGHV3-64A0A075B6Q5 118 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 H7C2G1 150 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 LST1O00453 97 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 DAZ2Q13117 558 aaKnown RBP3.48□□□□□ -1.85
LINC00458-202ENST00000427299 DEFB112Q30KQ8 113 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 FAM19A3Q7Z5A8 133 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 DAZ4Q86SG3 579 aaKnown RBP3.48□□□□□ -1.85
LINC00458-202ENST00000427299 MUSTN1Q8IVN3 82 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 TMEM86BQ8N661 226 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 ZNF702PQ9H963 129 aa3.48□□□□□ -1.85
LINC00458-202ENST00000427299 DAZ3Q9NR90 486 aaKnown RBP3.48□□□□□ -1.85
LINC00458-202ENST00000427299 SPTAN1Q13813 2472 aaKnown RBP3.48□□□□□ -1.85
LINC00458-202ENST00000427299 ANKRD17O75179 2603 aaKnown RBP3.47□□□□□ -1.85
LINC00458-202ENST00000427299 BAHCC1Q9P281 2608 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 UBE2L6O14933 153 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 MT-ATP8P03928 68 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 ATP5G1P05496 136 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 INAFM2P0DMQ5 153 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
LINC00458-202ENST00000427299 DEFB131AP59861 70 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 Q8N2B8 174 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 TMEM101Q96IK0 257 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 ATRXP46100 2492 aa3.47□□□□□ -1.85
LINC00458-202ENST00000427299 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 TRAV4A0A0B4J268 109 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 COX7A2LO14548 114 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 CRPP02741 224 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 TTC32Q5I0X7 151 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 MEIG1Q5JSS6 88 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.46□□□□□ -1.86
LINC00458-202ENST00000427299 IMUPQ9GZP8 106 aa3.46□□□□□ -1.86
LINC00458-202ENST00000427299 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms