RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 AMELXQ99217 191 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 ANK2Q01484 3957 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 TRGV4A0A0C4DH28 118 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 E9PLD3 99 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 DEFB130BP0DP73 79 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 DEFB130AP0DP74 79 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 DAZ4Q86SG3 579 aaKnown RBP5.74□□□□□ -1.49
COL12A1-204ENST00000419671 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 C3orf56Q8N813 242 aa5.74□□□□□ -1.49
COL12A1-204ENST00000419671 DAZ3Q9NR90 486 aaKnown RBP5.74□□□□□ -1.49
COL12A1-204ENST00000419671 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
COL12A1-204ENST00000419671 KRTAP10-11P60412 298 aa5.73□□□□□ -1.49
COL12A1-204ENST00000419671 WFDC2Q14508 124 aa5.73□□□□□ -1.49
COL12A1-204ENST00000419671 TAL2Q16559 108 aa5.73□□□□□ -1.49
COL12A1-204ENST00000419671 RNASE13Q5GAN3 156 aaKnown RBP5.73□□□□□ -1.49
COL12A1-204ENST00000419671 TRBV20-1A0A075B6N2 111 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 DEFB4AO15263 64 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 ETDBQ3ZM63 59 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 FAM222AQ5U5X8 452 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 HRCT1Q6UXD1 115 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 CHAC1Q9BUX1 264 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 A0A0J9YXV3 536 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
COL12A1-204ENST00000419671 EGFEM1PQ0D2K5 195 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 GAGE2BQ13066 116 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 TMEM170BQ5T4T1 132 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 FAM19A1Q7Z5A9 133 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 SBSPONQ8IVN8 264 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 Q8NAQ8 132 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 HIGD1BQ9P298 99 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 PKIGQ9Y2B9 76 aa5.72□□□□□ -1.49
COL12A1-204ENST00000419671 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.5
COL12A1-204ENST00000419671 ZNF22P17026 224 aaPredicted RBP5.71□□□□□ -1.5
COL12A1-204ENST00000419671 C1orf195Q5TG92 126 aa5.71□□□□□ -1.5
COL12A1-204ENST00000419671 Q5XG85 94 aa5.71□□□□□ -1.5
COL12A1-204ENST00000419671 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
COL12A1-204ENST00000419671 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
COL12A1-204ENST00000419671 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 LYRM9A8MSI8 78 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 MIFP14174 115 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 HERVK_113P61574 105 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 CELA1Q9UNI1 258 aa5.7□□□□□ -1.5
COL12A1-204ENST00000419671 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
COL12A1-204ENST00000419671 UBE2D1P51668 147 aa5.69□□□□□ -1.5
COL12A1-204ENST00000419671 LINC01620Q4KN68 170 aa5.69□□□□□ -1.5
COL12A1-204ENST00000419671 RETNQ9HD89 108 aa5.69□□□□□ -1.5
COL12A1-204ENST00000419671 MAST4O15021 2626 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 APOMO95445 188 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 TMEM243Q9BU79 118 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 IGHV3-64A0A075B6Q5 118 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 TRBV6-8A0A0A6YYG3 113 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 GYPEP15421 78 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 HERVK_113P63121 156 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 PRO0461Q9UI25 63 aa5.68□□□□□ -1.5
COL12A1-204ENST00000419671 J3QQQ9 107 aa5.67□□□□□ -1.5
COL12A1-204ENST00000419671 FXYD2P54710 66 aa5.67□□□□□ -1.5
COL12A1-204ENST00000419671 VSIG2Q96IQ7 327 aa5.67□□□□□ -1.5
COL12A1-204ENST00000419671 CDC42SE2Q9NRR3 84 aa5.67□□□□□ -1.5
COL12A1-204ENST00000419671 TRAV8-3A0A0A6YYJ7 113 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 FAM236DA0A1B0GTK5 79 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 H7C423 109 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 LEPROTO15243 131 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 FAM236CP0DP71 79 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 GCSHP23434 173 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 DAD1P61803 113 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 COX6A2Q02221 97 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 CEND1Q8N111 149 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 A0A0J9YY99 117 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 UBE2L6O14933 153 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 OXTP01178 125 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 IGHV3-30-3P0DP02 117 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 FAM19A3Q7Z5A8 133 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 CDKN2A-AS1Q9UH64 79 aa5.66□□□□□ -1.5
COL12A1-204ENST00000419671 COL6A5A8TX70 2615 aa5.65□□□□□ -1.5
COL12A1-204ENST00000419671 IGLV4-60A0A075B6I1 120 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 H3BMG7 143 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 PAX4O43316 350 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 SNCGO76070 127 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 SPART-AS1P0CW21 52 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 LGALS3P17931 250 aaKnown RBP5.65□□□□□ -1.51
COL12A1-204ENST00000419671 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 CARD19Q96LW7 228 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 HIST1H4GQ99525 98 aa5.65□□□□□ -1.51
COL12A1-204ENST00000419671 A0A096LPF7 62 aa5.64□□□□□ -1.51
COL12A1-204ENST00000419671 TRAV13-1A0A0B4J241 112 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms