RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ERG28Q9UKR5 140 aa10.21□□□□□ -0.77
HLA-DPA1-242ENST00000419277 IGHV3-33P01772 117 aa10.21□□□□□ -0.78
HLA-DPA1-242ENST00000419277 GYPEP15421 78 aa10.21□□□□□ -0.78
HLA-DPA1-242ENST00000419277 RBX1P62877 108 aa10.21□□□□□ -0.78
HLA-DPA1-242ENST00000419277 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.78
HLA-DPA1-242ENST00000419277 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.78
HLA-DPA1-242ENST00000419277 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 H3BMG7 143 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 COX6A2Q02221 97 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 ZNF625Q96I27 306 aaPredicted RBP10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 Q9H8V8 135 aa10.2□□□□□ -0.78
HLA-DPA1-242ENST00000419277 M0QXV9 152 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 ATP5G1P05496 136 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 A8MZ25 164 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 PAX4O43316 350 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 PRSS2P07478 247 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 DAD1P61803 113 aa10.19□□□□□ -0.78
HLA-DPA1-242ENST00000419277 TEP1Q99973 2627 aaKnown RBP10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 COX6CP09669 75 aa10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 GAGE6Q13070 117 aa10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 PRIMA1Q86XR5 153 aa10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 Q8NAQ8 132 aa10.18□□□□□ -0.78
HLA-DPA1-242ENST00000419277 A0A087WZ39 114 aa10.17□□□□□ -0.78
HLA-DPA1-242ENST00000419277 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
HLA-DPA1-242ENST00000419277 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 G3V4G9 280 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 SCGB1C2P0DMR2 95 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 IGHV4-30-4P0DP06 118 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 SS18Q15532 418 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 Q1RN00 199 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 ADAMTSL4-AS1Q5T5F5 129 aa10.16□□□□□ -0.78
HLA-DPA1-242ENST00000419277 PSMB2P49721 201 aa10.15□□□□□ -0.78
HLA-DPA1-242ENST00000419277 COX7B2Q8TF08 81 aa10.15□□□□□ -0.78
HLA-DPA1-242ENST00000419277 MRPL23Q16540 153 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-242ENST00000419277 MEIG1Q5JSS6 88 aa10.14□□□□□ -0.79
HLA-DPA1-242ENST00000419277 ATRQ13535 2644 aa10.14□□□□□ -0.79
HLA-DPA1-242ENST00000419277 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 SPATA3Q8NHX4 192 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 VPS25Q9BRG1 176 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 EGFEM1PQ0D2K5 195 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 LINC01600Q96MT4 127 aa10.13□□□□□ -0.79
HLA-DPA1-242ENST00000419277 H3BNG1 76 aa10.12□□□□□ -0.79
HLA-DPA1-242ENST00000419277 TCL1BO95988 128 aa10.12□□□□□ -0.79
HLA-DPA1-242ENST00000419277 VWFP04275 2813 aa10.12□□□□□ -0.79
HLA-DPA1-242ENST00000419277 IBA57-AS1B1ANH7 110 aa10.11□□□□□ -0.79
HLA-DPA1-242ENST00000419277 ICOSQ9Y6W8 199 aa10.11□□□□□ -0.79
HLA-DPA1-242ENST00000419277 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
HLA-DPA1-242ENST00000419277 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 CXCL5P42830 114 aa10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 WFDC2Q14508 124 aa10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 F8P00451 2351 aa10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 Q8IZM0 81 aa10.1□□□□□ -0.79
HLA-DPA1-242ENST00000419277 RNF151Q2KHN1 245 aa10.09□□□□□ -0.79
HLA-DPA1-242ENST00000419277 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
HLA-DPA1-242ENST00000419277 LELP1Q5T871 98 aa10.09□□□□□ -0.79
HLA-DPA1-242ENST00000419277 TEN1Q86WV5 123 aa10.09□□□□□ -0.79
HLA-DPA1-242ENST00000419277 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-242ENST00000419277 TRIAP1O43715 76 aa10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 MUC7Q8TAX7 377 aa10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
HLA-DPA1-242ENST00000419277 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
HLA-DPA1-242ENST00000419277 PPDPFLQ8WWR9 84 aa10.06□□□□□ -0.8
HLA-DPA1-242ENST00000419277 SLC25A20O43772 301 aa10.05□□□□□ -0.8
HLA-DPA1-242ENST00000419277 FLNBO75369 2602 aaKnown RBP10.05□□□□□ -0.8
HLA-DPA1-242ENST00000419277 CELA1Q9UNI1 258 aa10.05□□□□□ -0.8
HLA-DPA1-242ENST00000419277 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 H3BT86 120 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 H7C2G1 150 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 COX17Q14061 63 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 FOXI1Q12951 378 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 TOMM7Q9P0U1 55 aa10.04□□□□□ -0.8
HLA-DPA1-242ENST00000419277 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 LST1O00453 97 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 COX7A2LO14548 114 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 REG3AQ06141 175 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 C6orf226Q5I0X4 101 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 DAND5Q8N907 189 aa10.03□□□□□ -0.8
HLA-DPA1-242ENST00000419277 CRPP02741 224 aa10.02□□□□□ -0.8
HLA-DPA1-242ENST00000419277 XCL1P47992 114 aa10.02□□□□□ -0.8
HLA-DPA1-242ENST00000419277 PCP4P48539 62 aa10.02□□□□□ -0.8
HLA-DPA1-242ENST00000419277 NPC2P61916 151 aa10.02□□□□□ -0.8
HLA-DPA1-242ENST00000419277 CARD19Q96LW7 228 aa10.02□□□□□ -0.8
HLA-DPA1-242ENST00000419277 C9JAW5 83 aa10.02□□□□□ -0.81
HLA-DPA1-242ENST00000419277 DEFB4AO15263 64 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms