RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZNF22P17026 224 aaPredicted RBP14.23□□□□□ -0.13
CASC3-203ENST00000418132 UBE2V1Q13404 147 aa14.23□□□□□ -0.13
CASC3-203ENST00000418132 TM2D2Q9BX73 214 aa14.23□□□□□ -0.13
CASC3-203ENST00000418132 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 CCL25O15444 150 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 TAL2Q16559 108 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 LINC00242Q5T6M2 205 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 PTTG1IPP53801 180 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 HIST1H4GQ99525 98 aa14.22□□□□□ -0.13
CASC3-203ENST00000418132 IGLL5B9A064 214 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 Q8N3U1 123 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 GEMIN7Q9H840 131 aaKnown RBP14.2□□□□□ -0.14
CASC3-203ENST00000418132 IGLV5-45A0A087WSX0 123 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 TMEM223A0PJW6 202 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 TSPEAR-AS2P59090 65 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 RAB37Q96AX2 223 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 PLEKHB2Q96CS7 222 aa14.2□□□□□ -0.14
CASC3-203ENST00000418132 C9orf118A6NHY6 69 aa14.19□□□□□ -0.14
CASC3-203ENST00000418132 HERVK_113P63121 156 aa14.19□□□□□ -0.14
CASC3-203ENST00000418132 SMIM13P0DJ93 91 aa14.18□□□□□ -0.14
CASC3-203ENST00000418132 COX6A2Q02221 97 aa14.18□□□□□ -0.14
CASC3-203ENST00000418132 SCGB1D4Q6XE38 83 aa14.18□□□□□ -0.14
CASC3-203ENST00000418132 WFDC10BQ8IUB3 73 aa14.18□□□□□ -0.14
CASC3-203ENST00000418132 FBN3Q75N90 2809 aa14.17□□□□□ -0.14
CASC3-203ENST00000418132 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 LINC00959A0A1B0GUT2 108 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 J3QQQ9 107 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 ANGP03950 147 aaKnown RBP14.16□□□□□ -0.14
CASC3-203ENST00000418132 CDKN2A-AS1Q9UH64 79 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 H3BUT2 72 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 LINC00269Q8N2A0 174 aa14.16□□□□□ -0.14
CASC3-203ENST00000418132 NAA38Q9BRA0 125 aaKnown RBP14.16□□□□□ -0.14
CASC3-203ENST00000418132 NHP2Q9NX24 153 aaKnown RBP14.16□□□□□ -0.14
CASC3-203ENST00000418132 K7ERJ3 54 aa14.15□□□□□ -0.14
CASC3-203ENST00000418132 LEPROTO15243 131 aa14.15□□□□□ -0.14
CASC3-203ENST00000418132 IGHV3-64A0A075B6Q5 118 aa14.14□□□□□ -0.15
CASC3-203ENST00000418132 LGALS3P17931 250 aaKnown RBP14.14□□□□□ -0.15
CASC3-203ENST00000418132 REG3AQ06141 175 aa14.13□□□□□ -0.15
CASC3-203ENST00000418132 CLPSL2Q6UWE3 100 aa14.13□□□□□ -0.15
CASC3-203ENST00000418132 LINC00588Q9Y4M8 146 aa14.13□□□□□ -0.15
CASC3-203ENST00000418132 SS18Q15532 418 aa14.12□□□□□ -0.15
CASC3-203ENST00000418132 PRR34Q9NV39 138 aa14.12□□□□□ -0.15
CASC3-203ENST00000418132 IGHV3-30P01768 117 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 IGHV3-33P01772 117 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 IGHV3-30-3P0DP02 117 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 IGHV3-30-5P0DP03 117 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 CCL18P55774 89 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 SRSF9Q13242 221 aaKnown RBP eCLIP14.11□□□□□ -0.15
CASC3-203ENST00000418132 KLK12Q9UKR0 248 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 IGHV3OR16-9A0A0B4J2B5 98 aa14.11□□□□□ -0.15
CASC3-203ENST00000418132 TRAV8-3A0A0A6YYJ7 113 aa14.1□□□□□ -0.15
CASC3-203ENST00000418132 IGHV1-58A0A0C4DH39 117 aa14.1□□□□□ -0.15
CASC3-203ENST00000418132 SPINK8P0C7L1 97 aa14.1□□□□□ -0.15
CASC3-203ENST00000418132 LINC01556Q5JQF7 62 aa14.1□□□□□ -0.15
CASC3-203ENST00000418132 APLNQ9ULZ1 77 aa14.1□□□□□ -0.15
CASC3-203ENST00000418132 NUPR2A6NF83 97 aa14.09□□□□□ -0.15
CASC3-203ENST00000418132 A0A1W2PPM0 123 aa14.08□□□□□ -0.16
CASC3-203ENST00000418132 GAGE10A6NGK3 116 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 SMIM1B2RUZ4 78 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 DNAH10OSP0CZ25 163 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 ENHOQ6UWT2 76 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 IGLV5-39A0A0G2JS06 123 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 UPK3BQ9BT76 320 aa14.07□□□□□ -0.16
CASC3-203ENST00000418132 SPANXB1Q9NS25 103 aaPredicted RBP14.07□□□□□ -0.16
CASC3-203ENST00000418132 A0A1B0GWB2 263 aa14.06□□□□□ -0.16
CASC3-203ENST00000418132 XCL1P47992 114 aa14.06□□□□□ -0.16
CASC3-203ENST00000418132 KLK5Q9Y337 293 aaPredicted RBP14.06□□□□□ -0.16
CASC3-203ENST00000418132 A0A087WZ39 114 aa14.05□□□□□ -0.16
CASC3-203ENST00000418132 CHCHD10Q8WYQ3 142 aaPredicted RBP14.05□□□□□ -0.16
CASC3-203ENST00000418132 DYNC2H1Q8NCM8 4307 aaKnown RBP14.05□□□□□ -0.16
CASC3-203ENST00000418132 CD164L2Q6UWJ8 174 aa14.04□□□□□ -0.16
CASC3-203ENST00000418132 GTF2H5Q6ZYL4 71 aa14.04□□□□□ -0.16
CASC3-203ENST00000418132 K7EP34 96 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 FABP2P12104 132 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 IGLV10-54A0A075B6I4 117 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 CRPP02741 224 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 C10orf126Q8N4M7 172 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 UBE2WQ96B02 151 aa14.03□□□□□ -0.16
CASC3-203ENST00000418132 TMEM238LA0A1B0GVL6 79 aa14.02□□□□□ -0.16
CASC3-203ENST00000418132 A6NJY4 79 aa14.02□□□□□ -0.16
CASC3-203ENST00000418132 C5orf38Q86SI9 138 aa14.02□□□□□ -0.16
CASC3-203ENST00000418132 CSMD3Q7Z407 3707 aa14.02□□□□□ -0.17
CASC3-203ENST00000418132 TRAV8-4A0A0B4J246 113 aa14.02□□□□□ -0.17
CASC3-203ENST00000418132 SPCS1Q9Y6A9 102 aa14.02□□□□□ -0.17
CASC3-203ENST00000418132 MIAQ16674 131 aa14.01□□□□□ -0.17
CASC3-203ENST00000418132 LINC01561Q8N1V8 128 aa14.01□□□□□ -0.17
CASC3-203ENST00000418132 A0A0J9YXY3 114 aa14□□□□□ -0.17
CASC3-203ENST00000418132 ZFAND6Q6FIF0 208 aa14□□□□□ -0.17
CASC3-203ENST00000418132 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
CASC3-203ENST00000418132 FOXI1Q12951 378 aa13.99□□□□□ -0.17
CASC3-203ENST00000418132 NDUFA12Q9UI09 145 aa13.98□□□□□ -0.17
CASC3-203ENST00000418132 COX7A2LO14548 114 aa13.98□□□□□ -0.17
CASC3-203ENST00000418132 Q9H8V8 135 aa13.97□□□□□ -0.17
CASC3-203ENST00000418132 GAGE12HA6NDE8 117 aa13.96□□□□□ -0.17
CASC3-203ENST00000418132 TMEM238C9JI98 176 aa13.96□□□□□ -0.18
CASC3-203ENST00000418132 APOMO95445 188 aa13.96□□□□□ -0.18
CASC3-203ENST00000418132 TGP01266 2768 aa13.95□□□□□ -0.18
CASC3-203ENST00000418132 TENM2Q9NT68 2774 aa13.95□□□□□ -0.18
CASC3-203ENST00000418132 IBA57-AS1B1ANH7 110 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 NDUFA1O15239 70 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 672.8 ms