RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KIR2DL5BQ8NHK3 375 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 TMEM243Q9BU79 118 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 IGLV5-45A0A087WSX0 123 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 IGHV3-38A0A0C4DH36 116 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 LY6G6CO95867 125 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 IFITM1P13164 125 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 PRO1854Q9UHT4 67 aa9.13□□□□□ -0.95
SMARCB1-203ENST00000407082 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE7O76087 117 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 APOC4P55056 127 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 Q6ZUT4 128 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 SPANXDQ9BXN6 97 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 SPANXCQ9NY87 97 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 APOMO95445 188 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE4Q13068 117 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 GAGE5Q13069 117 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 HERC2O95714 4834 aa9.11□□□□□ -0.95
SMARCB1-203ENST00000407082 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-203ENST00000407082 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 CFC1BP0CG36 223 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 CFC1P0CG37 223 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 VPS25Q9BRG1 176 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 RETNQ9HD89 108 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
SMARCB1-203ENST00000407082 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 NDUFA1O15239 70 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 TSPAN13O95857 204 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 RBX1P62877 108 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 HERV-K104P63124 156 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 Q9UF83 564 aa9.08□□□□□ -0.96
SMARCB1-203ENST00000407082 A4D1N5 150 aa9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 LYRM9A8MSI8 78 aa9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 MIAQ16674 131 aa9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 RNASE13Q5GAN3 156 aaKnown RBP9.07□□□□□ -0.96
SMARCB1-203ENST00000407082 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 PRSS2P07478 247 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 FHL2Q14192 279 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 DEFB135Q30KP9 77 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
SMARCB1-203ENST00000407082 IGLV5-39A0A0G2JS06 123 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 H3BMG7 143 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 COX6CP09669 75 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 PSMB2P49721 201 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 LINC00242Q5T6M2 205 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 ATP6V0E2Q8NHE4 81 aa9.05□□□□□ -0.96
SMARCB1-203ENST00000407082 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
SMARCB1-203ENST00000407082 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
SMARCB1-203ENST00000407082 PLECQ15149 4684 aaKnown RBP9.03□□□□□ -0.96
SMARCB1-203ENST00000407082 Q1RN00 199 aa9.03□□□□□ -0.96
SMARCB1-203ENST00000407082 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
SMARCB1-203ENST00000407082 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 TRBV30A0A0K0K1B3 111 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 M0QXV9 152 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 LINC00694P0DN24 101 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 LITAFQ99732 161 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 CHCHD5Q9BSY4 110 aa9.02□□□□□ -0.97
SMARCB1-203ENST00000407082 RYR1P21817 5038 aa9.01□□□□□ -0.97
SMARCB1-203ENST00000407082 TEX48A0A1B0GUV7 120 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 DEFB130BP0DP73 79 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 DEFB130AP0DP74 79 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 COX6A2Q02221 97 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 WFDC2Q14508 124 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 ATXN8Q156A1 80 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 Q9H8V8 135 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
SMARCB1-203ENST00000407082 A0A1B0GUV1 79 aa8.99□□□□□ -0.97
SMARCB1-203ENST00000407082 MIFP14174 115 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms