RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
COL13A1-205ENST00000398978 ZNF843Q8N446 348 aa13.88□□□□□ -0.19
COL13A1-205ENST00000398978 C15orf53Q8NAA6 179 aa13.88□□□□□ -0.19
COL13A1-205ENST00000398978 TOMM7Q9P0U1 55 aa13.88□□□□□ -0.19
COL13A1-205ENST00000398978 CITED1Q99966 193 aa13.88□□□□□ -0.19
COL13A1-205ENST00000398978 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
COL13A1-205ENST00000398978 CDC42SE2Q9NRR3 84 aa13.87□□□□□ -0.19
COL13A1-205ENST00000398978 GAGE6Q13070 117 aa13.87□□□□□ -0.19
COL13A1-205ENST00000398978 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
COL13A1-205ENST00000398978 M0QXV9 152 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 UBE2L6O14933 153 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 TENM4Q6N022 2769 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 IFITM1P13164 125 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 GAGE2BQ13066 116 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 GAGE2EQ4V326 116 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 GAGE2DQ9UEU5 116 aa13.86□□□□□ -0.19
COL13A1-205ENST00000398978 TIMM17BO60830 172 aa13.85□□□□□ -0.19
COL13A1-205ENST00000398978 F5H768 121 aa13.84□□□□□ -0.19
COL13A1-205ENST00000398978 DAZ2Q13117 558 aaKnown RBP13.83□□□□□ -0.2
COL13A1-205ENST00000398978 DAZ4Q86SG3 579 aaKnown RBP13.83□□□□□ -0.2
COL13A1-205ENST00000398978 DAZ3Q9NR90 486 aaKnown RBP13.83□□□□□ -0.2
COL13A1-205ENST00000398978 PLAC8L1A1L4L8 177 aa13.82□□□□□ -0.2
COL13A1-205ENST00000398978 TMEM243Q9BU79 118 aa13.82□□□□□ -0.2
COL13A1-205ENST00000398978 H3BT86 120 aa13.81□□□□□ -0.2
COL13A1-205ENST00000398978 NHLRC4P0CG21 123 aaPredicted RBP13.81□□□□□ -0.2
COL13A1-205ENST00000398978 IGLV4-60A0A075B6I1 120 aa13.81□□□□□ -0.2
COL13A1-205ENST00000398978 HIVEP2P31629 2446 aa13.8□□□□□ -0.2
COL13A1-205ENST00000398978 TRGV4A0A0C4DH28 118 aa13.8□□□□□ -0.2
COL13A1-205ENST00000398978 C11orf68Q9H3H3 251 aaKnown RBP13.8□□□□□ -0.2
COL13A1-205ENST00000398978 TRBV10-1A0A0K0K1A3 114 aa13.8□□□□□ -0.2
COL13A1-205ENST00000398978 FAM218AQ96MZ4 157 aa13.8□□□□□ -0.2
COL13A1-205ENST00000398978 HERV-K104P63124 156 aa13.79□□□□□ -0.2
COL13A1-205ENST00000398978 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
COL13A1-205ENST00000398978 Q9HAA7 133 aa13.78□□□□□ -0.2
COL13A1-205ENST00000398978 LINC01006Q8NI28 216 aa13.78□□□□□ -0.2
COL13A1-205ENST00000398978 VWFP04275 2813 aa13.78□□□□□ -0.2
COL13A1-205ENST00000398978 NOTCH2Q04721 2471 aa13.78□□□□□ -0.2
COL13A1-205ENST00000398978 COX7A2LO14548 114 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 NDUFV3P56181 108 aaKnown RBP13.77□□□□□ -0.21
COL13A1-205ENST00000398978 MIR7-3HGQ8N6C7 128 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 DEFB130BP0DP73 79 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 DEFB130AP0DP74 79 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 C5orf38Q86SI9 138 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 CHCHD5Q9BSY4 110 aa13.77□□□□□ -0.21
COL13A1-205ENST00000398978 CSDC2Q9Y534 153 aaKnown RBP13.77□□□□□ -0.21
COL13A1-205ENST00000398978 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
COL13A1-205ENST00000398978 B5MCH6 92 aa13.76□□□□□ -0.21
COL13A1-205ENST00000398978 PFN2P35080 140 aa13.75□□□□□ -0.21
COL13A1-205ENST00000398978 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
COL13A1-205ENST00000398978 A0A096LPF7 62 aa13.75□□□□□ -0.21
COL13A1-205ENST00000398978 LINC01600Q96MT4 127 aa13.75□□□□□ -0.21
COL13A1-205ENST00000398978 CCDC179H3BU77 68 aa13.74□□□□□ -0.21
COL13A1-205ENST00000398978 LINC00158P58513 81 aa13.74□□□□□ -0.21
COL13A1-205ENST00000398978 CLPSL2Q6UWE3 100 aa13.74□□□□□ -0.21
COL13A1-205ENST00000398978 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
COL13A1-205ENST00000398978 PDZD2O15018 2839 aa13.73□□□□□ -0.21
COL13A1-205ENST00000398978 LINC00337Q8N6G1 96 aa13.73□□□□□ -0.21
COL13A1-205ENST00000398978 FAM19A3Q7Z5A8 133 aa13.72□□□□□ -0.21
COL13A1-205ENST00000398978 C16orf74Q96GX8 76 aa13.72□□□□□ -0.21
COL13A1-205ENST00000398978 C19orf73Q9NVV2 129 aa13.72□□□□□ -0.21
COL13A1-205ENST00000398978 BAALC-AS2P0C853 105 aa13.72□□□□□ -0.21
COL13A1-205ENST00000398978 TMEM86BQ8N661 226 aa13.72□□□□□ -0.21
COL13A1-205ENST00000398978 FASNP49327 2511 aaKnown RBP13.71□□□□□ -0.22
COL13A1-205ENST00000398978 CSNK1G2-AS1Q8NCQ2 148 aa13.7□□□□□ -0.22
COL13A1-205ENST00000398978 IGKV2-28A0A075B6P5 120 aa13.7□□□□□ -0.22
COL13A1-205ENST00000398978 IGKV2D-28P01615 120 aa13.7□□□□□ -0.22
COL13A1-205ENST00000398978 FHL2Q14192 279 aa13.7□□□□□ -0.22
COL13A1-205ENST00000398978 SND1-IT1Q9HBX3 110 aa13.7□□□□□ -0.22
COL13A1-205ENST00000398978 TRBV6-8A0A0A6YYG3 113 aa13.68□□□□□ -0.22
COL13A1-205ENST00000398978 HELZ2Q9BYK8 2649 aaKnown RBP13.68□□□□□ -0.22
COL13A1-205ENST00000398978 IGLV1-51P01701 117 aa13.68□□□□□ -0.22
COL13A1-205ENST00000398978 C22orf24Q9Y442 160 aa13.68□□□□□ -0.22
COL13A1-205ENST00000398978 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 CRPP02741 224 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 ATP5G1P05496 136 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 SMCR5Q8TEV8 140 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 SMIM20Q8N5G0 67 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 C3orf56Q8N813 242 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 XCL1P47992 114 aa13.67□□□□□ -0.22
COL13A1-205ENST00000398978 DEFB121Q5J5C9 76 aa13.66□□□□□ -0.22
COL13A1-205ENST00000398978 A0A087WYN8 130 aa13.65□□□□□ -0.22
COL13A1-205ENST00000398978 CCL18P55774 89 aa13.65□□□□□ -0.22
COL13A1-205ENST00000398978 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
COL13A1-205ENST00000398978 C9orf129Q5T035 196 aaKnown RBP13.65□□□□□ -0.22
COL13A1-205ENST00000398978 SMR3AQ99954 134 aa13.65□□□□□ -0.22
COL13A1-205ENST00000398978 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.23
COL13A1-205ENST00000398978 COPS9Q8WXC6 57 aa13.65□□□□□ -0.23
COL13A1-205ENST00000398978 DEFB4AO15263 64 aa13.64□□□□□ -0.23
COL13A1-205ENST00000398978 SMIM11BQ8TCY0 68 aa13.64□□□□□ -0.23
COL13A1-205ENST00000398978 OR13C6PQ8NH95 151 aa13.64□□□□□ -0.23
COL13A1-205ENST00000398978 OVOL2Q9BRP0 275 aa13.63□□□□□ -0.23
COL13A1-205ENST00000398978 PAX4O43316 350 aa13.62□□□□□ -0.23
COL13A1-205ENST00000398978 GYPEP15421 78 aa13.62□□□□□ -0.23
COL13A1-205ENST00000398978 GAGE2AQ6NT46 116 aa13.62□□□□□ -0.23
COL13A1-205ENST00000398978 Q8N3U1 123 aa13.61□□□□□ -0.23
COL13A1-205ENST00000398978 TRACP01848 142 aa13.61□□□□□ -0.23
COL13A1-205ENST00000398978 SLPIP03973 132 aa13.61□□□□□ -0.23
COL13A1-205ENST00000398978 SPATA3Q8NHX4 192 aa13.61□□□□□ -0.23
COL13A1-205ENST00000398978 TRAV13-2A0A0B4J235 113 aa13.6□□□□□ -0.23
COL13A1-205ENST00000398978 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms