RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 EIF4EBP3O60516 100 aaPredicted RBP9.92□□□□□ -0.82
SNCA-204ENST00000394989 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
SNCA-204ENST00000394989 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
SNCA-204ENST00000394989 TINCRA0A1B0GVN0 87 aa9.91□□□□□ -0.82
SNCA-204ENST00000394989 CITED1Q99966 193 aa9.91□□□□□ -0.82
SNCA-204ENST00000394989 OVOL2Q9BRP0 275 aa9.91□□□□□ -0.82
SNCA-204ENST00000394989 RPL36AP83881 106 aaKnown RBP9.91□□□□□ -0.82
SNCA-204ENST00000394989 RPL36ALQ969Q0 106 aaKnown RBP9.91□□□□□ -0.82
SNCA-204ENST00000394989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.9□□□□□ -0.82
SNCA-204ENST00000394989 TIMM21Q9BVV7 248 aa9.9□□□□□ -0.82
SNCA-204ENST00000394989 IGHV3-33P01772 117 aa9.9□□□□□ -0.82
SNCA-204ENST00000394989 TRGV2A0A075B6R0 118 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 A8MZ25 164 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
SNCA-204ENST00000394989 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
SNCA-204ENST00000394989 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 SBSPONQ8IVN8 264 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 IGHV1-58A0A0C4DH39 117 aa9.89□□□□□ -0.83
SNCA-204ENST00000394989 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
SNCA-204ENST00000394989 DAND5Q8N907 189 aa9.88□□□□□ -0.83
SNCA-204ENST00000394989 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 COX6A2Q02221 97 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 TRIAP1O43715 76 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 LITAFQ99732 161 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 ATRQ13535 2644 aa9.87□□□□□ -0.83
SNCA-204ENST00000394989 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 TRBV6-4A0A1B0GX49 114 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
SNCA-204ENST00000394989 FHL2Q14192 279 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 ATXN8Q156A1 80 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 UBE2WQ96B02 151 aa9.86□□□□□ -0.83
SNCA-204ENST00000394989 CSDC2Q9Y534 153 aaKnown RBP9.86□□□□□ -0.83
SNCA-204ENST00000394989 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
SNCA-204ENST00000394989 TIRAPP58753 221 aa9.85□□□□□ -0.83
SNCA-204ENST00000394989 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
SNCA-204ENST00000394989 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
SNCA-204ENST00000394989 NDUFA12Q9UI09 145 aa9.84□□□□□ -0.83
SNCA-204ENST00000394989 ADAMTSL4-AS1Q5T5F5 129 aa9.83□□□□□ -0.84
SNCA-204ENST00000394989 X6R8D5 127 aa9.83□□□□□ -0.84
SNCA-204ENST00000394989 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
SNCA-204ENST00000394989 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
SNCA-204ENST00000394989 PPDPFQ9H3Y8 114 aa9.83□□□□□ -0.84
SNCA-204ENST00000394989 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
SNCA-204ENST00000394989 C9orf66Q5T8R8 295 aa9.82□□□□□ -0.84
SNCA-204ENST00000394989 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 MRPL23Q16540 153 aaKnown RBP9.81□□□□□ -0.84
SNCA-204ENST00000394989 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 H7C423 109 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 HERVK_113P63121 156 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
SNCA-204ENST00000394989 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
SNCA-204ENST00000394989 TRBV10-2A0A0K0K1G8 114 aa9.8□□□□□ -0.84
SNCA-204ENST00000394989 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
SNCA-204ENST00000394989 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
SNCA-204ENST00000394989 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
SNCA-204ENST00000394989 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
SNCA-204ENST00000394989 UBE2L6O14933 153 aa9.79□□□□□ -0.84
SNCA-204ENST00000394989 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 F5H768 121 aa9.78□□□□□ -0.84
SNCA-204ENST00000394989 A0A0B4J2C4 111 aa9.77□□□□□ -0.84
SNCA-204ENST00000394989 NDUFA1O15239 70 aa9.77□□□□□ -0.84
SNCA-204ENST00000394989 ANK2Q01484 3957 aa9.77□□□□□ -0.85
SNCA-204ENST00000394989 COX6CP09669 75 aa9.77□□□□□ -0.85
SNCA-204ENST00000394989 MIAQ16674 131 aa9.77□□□□□ -0.85
SNCA-204ENST00000394989 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
SNCA-204ENST00000394989 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
SNCA-204ENST00000394989 DEFB135Q30KP9 77 aa9.76□□□□□ -0.85
SNCA-204ENST00000394989 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
SNCA-204ENST00000394989 RPL13AP40429 203 aaKnown RBP9.75□□□□□ -0.85
SNCA-204ENST00000394989 Q9H8V8 135 aa9.75□□□□□ -0.85
SNCA-204ENST00000394989 DEFB4AO15263 64 aa9.74□□□□□ -0.85
SNCA-204ENST00000394989 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
SNCA-204ENST00000394989 TIMM17BO60830 172 aa9.74□□□□□ -0.85
SNCA-204ENST00000394989 GYPEP15421 78 aa9.73□□□□□ -0.85
SNCA-204ENST00000394989 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
SNCA-204ENST00000394989 M0QXV9 152 aa9.73□□□□□ -0.85
SNCA-204ENST00000394989 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
SNCA-204ENST00000394989 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
SNCA-204ENST00000394989 WFDC9Q8NEX5 89 aa9.72□□□□□ -0.85
SNCA-204ENST00000394989 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
SNCA-204ENST00000394989 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
SNCA-204ENST00000394989 PKD1L1Q8TDX9 2849 aa9.71□□□□□ -0.86
SNCA-204ENST00000394989 PRO0255Q9UI72 69 aa9.71□□□□□ -0.86
SNCA-204ENST00000394989 IGHV4-28A0A0C4DH34 117 aa9.7□□□□□ -0.86
SNCA-204ENST00000394989 LYRM9A8MSI8 78 aa9.7□□□□□ -0.86
SNCA-204ENST00000394989 FLNBO75369 2602 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms