RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ADAMTSL4-AS1Q5T5F5 129 aa10.85□□□□□ -0.67
UBE2D3-207ENST00000394801 FHL2Q14192 279 aa10.85□□□□□ -0.67
UBE2D3-207ENST00000394801 TMEM243Q9BU79 118 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 NDUFA1O15239 70 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 SCGB1C2P0DMR2 95 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 KIR2DL5BQ8NHK3 375 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 RNF183Q96D59 192 aa10.84□□□□□ -0.67
UBE2D3-207ENST00000394801 MIAQ16674 131 aa10.83□□□□□ -0.68
UBE2D3-207ENST00000394801 ANKRD29Q8N6D5 301 aa10.83□□□□□ -0.68
UBE2D3-207ENST00000394801 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
UBE2D3-207ENST00000394801 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
UBE2D3-207ENST00000394801 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
UBE2D3-207ENST00000394801 NSD1Q96L73 2696 aaPredicted RBP10.82□□□□□ -0.68
UBE2D3-207ENST00000394801 ERG28Q9UKR5 140 aa10.82□□□□□ -0.68
UBE2D3-207ENST00000394801 INAFM1C9JVW0 142 aa10.82□□□□□ -0.68
UBE2D3-207ENST00000394801 PRSS2P07478 247 aa10.82□□□□□ -0.68
UBE2D3-207ENST00000394801 VWFP04275 2813 aa10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 UBE2L6O14933 153 aa10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 IFITM1P13164 125 aa10.81□□□□□ -0.68
UBE2D3-207ENST00000394801 SLC25A20O43772 301 aa10.8□□□□□ -0.68
UBE2D3-207ENST00000394801 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
UBE2D3-207ENST00000394801 F5H768 121 aa10.8□□□□□ -0.68
UBE2D3-207ENST00000394801 CRLF1O75462 422 aa10.8□□□□□ -0.68
UBE2D3-207ENST00000394801 TRBV6-8A0A0A6YYG3 113 aa10.79□□□□□ -0.68
UBE2D3-207ENST00000394801 SMIM9A6NGZ8 99 aa10.79□□□□□ -0.68
UBE2D3-207ENST00000394801 X6R8D5 127 aa10.79□□□□□ -0.68
UBE2D3-207ENST00000394801 LINC01600Q96MT4 127 aa10.78□□□□□ -0.68
UBE2D3-207ENST00000394801 C9JAW5 83 aa10.77□□□□□ -0.68
UBE2D3-207ENST00000394801 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.68
UBE2D3-207ENST00000394801 SPATA3Q8NHX4 192 aa10.77□□□□□ -0.68
UBE2D3-207ENST00000394801 CITED1Q99966 193 aa10.77□□□□□ -0.68
UBE2D3-207ENST00000394801 Q9H8V8 135 aa10.77□□□□□ -0.68
UBE2D3-207ENST00000394801 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
UBE2D3-207ENST00000394801 ZNF625Q96I27 306 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-207ENST00000394801 ANAPC13Q9BS18 74 aa10.76□□□□□ -0.69
UBE2D3-207ENST00000394801 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
UBE2D3-207ENST00000394801 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
UBE2D3-207ENST00000394801 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
UBE2D3-207ENST00000394801 H7C2G1 150 aa10.74□□□□□ -0.69
UBE2D3-207ENST00000394801 GAGE6Q13070 117 aa10.74□□□□□ -0.69
UBE2D3-207ENST00000394801 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
UBE2D3-207ENST00000394801 HIVEP1P15822 2718 aa10.74□□□□□ -0.69
UBE2D3-207ENST00000394801 IGLV4-60A0A075B6I1 120 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 HERV-K104P63124 156 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 Q1RN00 199 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 NPC2P61916 151 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 LINC01620Q4KN68 170 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 DAND5Q8N907 189 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 LINC00308Q8TCZ7 52 aa10.73□□□□□ -0.69
UBE2D3-207ENST00000394801 TRIAP1O43715 76 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 RPL13AP40429 203 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 NBEAL2Q6ZNJ1 2754 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 LYRM9A8MSI8 78 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 PRIMA1Q86XR5 153 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 NTN5Q8WTR8 489 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 PPDPFQ9H3Y8 114 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 PRO0255Q9UI72 69 aa10.72□□□□□ -0.69
UBE2D3-207ENST00000394801 COPS9Q8WXC6 57 aa10.71□□□□□ -0.69
UBE2D3-207ENST00000394801 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 SNCGO76070 127 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 GYPEP15421 78 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 GAGE2BQ13066 116 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 ICOSQ9Y6W8 199 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 Q6Q795 121 aa10.7□□□□□ -0.7
UBE2D3-207ENST00000394801 NHLRC4P0CG21 123 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-207ENST00000394801 APOC4P55056 127 aa10.69□□□□□ -0.7
UBE2D3-207ENST00000394801 FAM222AQ5U5X8 452 aa10.69□□□□□ -0.7
UBE2D3-207ENST00000394801 A0A1B0GUV1 79 aa10.68□□□□□ -0.7
UBE2D3-207ENST00000394801 WFDC9Q8NEX5 89 aa10.68□□□□□ -0.7
UBE2D3-207ENST00000394801 COX6CP09669 75 aa10.68□□□□□ -0.7
UBE2D3-207ENST00000394801 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
UBE2D3-207ENST00000394801 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-207ENST00000394801 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
UBE2D3-207ENST00000394801 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
UBE2D3-207ENST00000394801 A0A087WZ39 114 aa10.67□□□□□ -0.7
UBE2D3-207ENST00000394801 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
UBE2D3-207ENST00000394801 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
UBE2D3-207ENST00000394801 WIPF1O43516 503 aa10.66□□□□□ -0.7
UBE2D3-207ENST00000394801 ATRQ13535 2644 aa10.66□□□□□ -0.7
UBE2D3-207ENST00000394801 A0A0U1RRA0 63 aa10.66□□□□□ -0.7
UBE2D3-207ENST00000394801 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
UBE2D3-207ENST00000394801 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
UBE2D3-207ENST00000394801 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
UBE2D3-207ENST00000394801 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
UBE2D3-207ENST00000394801 H3BT86 120 aa10.65□□□□□ -0.71
UBE2D3-207ENST00000394801 PAX4O43316 350 aa10.65□□□□□ -0.71
UBE2D3-207ENST00000394801 TTC32Q5I0X7 151 aa10.64□□□□□ -0.71
UBE2D3-207ENST00000394801 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
UBE2D3-207ENST00000394801 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
UBE2D3-207ENST00000394801 C2orf82Q6UX34 121 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms